Literature DB >> 22708024

Automatic 3D Segmentation of Ultrasound Images Using Atlas Registration and Statistical Texture Prior.

Xiaofeng Yang1, David Schuster, Viraj Master, Peter Nieh, Aaron Fenster, Baowei Fei.   

Abstract

We are developing a molecular image-directed, 3D ultrasound-guided, targeted biopsy system for improved detection of prostate cancer. In this paper, we propose an automatic 3D segmentation method for transrectal ultrasound (TRUS) images, which is based on multi-atlas registration and statistical texture prior. The atlas database includes registered TRUS images from previous patients and their segmented prostate surfaces. Three orthogonal Gabor filter banks are used to extract texture features from each image in the database. Patient-specific Gabor features from the atlas database are used to train kernel support vector machines (KSVMs) and then to segment the prostate image from a new patient. The segmentation method was tested in TRUS data from 5 patients. The average surface distance between our method and manual segmentation is 1.61 ± 0.35 mm, indicating that the atlas-based automatic segmentation method works well and could be used for 3D ultrasound-guided prostate biopsy.

Entities:  

Year:  2011        PMID: 22708024      PMCID: PMC3375607          DOI: 10.1117/12.877888

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  16 in total

1.  Prostate boundary segmentation from 2D ultrasound images.

Authors:  H M Ladak; F Mao; Y Wang; D B Downey; D A Steinman; A Fenster
Journal:  Med Phys       Date:  2000-08       Impact factor: 4.071

2.  3D Non-rigid Registration Using Surface and Local Salient Features for Transrectal Ultrasound Image-guided Prostate Biopsy.

Authors:  Xiaofeng Yang; Hamed Akbari; Luma Halig; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-03-01

3.  Semiautomatic nonrigid registration for the prostate and pelvic MR volumes.

Authors:  Baowei Fei; Jeffrey L Duerk; D Bruce Sodee; David L Wilson
Journal:  Acad Radiol       Date:  2005-07       Impact factor: 3.173

Review 4.  Ultrasound image segmentation: a survey.

Authors:  J Alison Noble; Djamal Boukerroui
Journal:  IEEE Trans Med Imaging       Date:  2006-08       Impact factor: 10.048

5.  Deformable segmentation of 3-D ultrasound prostate images using statistical texture matching method.

Authors:  Yiqiang Zhan; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2006-03       Impact factor: 10.048

6.  Discrete deformable model guided by partial active shape model for TRUS image segmentation.

Authors:  Pingkun Yan; Sheng Xu; Baris Turkbey; Jochen Kruecker
Journal:  IEEE Trans Biomed Eng       Date:  2010-02-05       Impact factor: 4.538

7.  3D Segmentation of Prostate Ultrasound images Using Wavelet Transform.

Authors:  Hamed Akbari; Xiaofeng Yang; Luma V Halig; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-03-14

8.  Detection and analysis of the intestinal ischemia using visible and invisible hyperspectral imaging.

Authors:  Hamed Akbari; Yukio Kosugi; Kazuyuki Kojima; Naofumi Tanaka
Journal:  IEEE Trans Biomed Eng       Date:  2010-05-10       Impact factor: 4.538

9.  A modified fuzzy C-means classification method using a multiscale diffusion filtering scheme.

Authors:  Hesheng Wang; Baowei Fei
Journal:  Med Image Anal       Date:  2008-07-05       Impact factor: 8.545

10.  Random systematic versus directed ultrasound guided transrectal core biopsies of the prostate.

Authors:  K K Hodge; J E McNeal; M K Terris; T A Stamey
Journal:  J Urol       Date:  1989-07       Impact factor: 7.450

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  14 in total

1.  3D Prostate Segmentation of Ultrasound Images Combining Longitudinal Image Registration and Machine Learning.

Authors:  Xiaofeng Yang; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2012-02-23

2.  Prostate CT segmentation method based on nonrigid registration in ultrasound-guided CT-based HDR prostate brachytherapy.

Authors:  Xiaofeng Yang; Peter Rossi; Tomi Ogunleye; David M Marcus; Ashesh B Jani; Hui Mao; Walter J Curran; Tian Liu
Journal:  Med Phys       Date:  2014-11       Impact factor: 4.071

3.  The Stacked-Ellipse Algorithm: An Ultrasound-Based 3-D Uterine Segmentation Tool for Enabling Adaptive Radiotherapy for Uterine Cervix Cancer.

Authors:  Sarah A Mason; Ingrid M White; Susan Lalondrelle; Jeffrey C Bamber; Emma J Harris
Journal:  Ultrasound Med Biol       Date:  2020-01-08       Impact factor: 2.998

4.  A New CT Prostate Segmentation for CT-Based HDR Brachytherapy.

Authors:  Xiaofeng Yang; Peter Rossi; Tomi Ogunleye; Ashesh B Jani; Walter J Curran; Tian Liu
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014

5.  A Molecular Image-directed, 3D Ultrasound-guided Biopsy System for the Prostate.

Authors:  Baowei Fei; David M Schuster; Viraj Master; Hamed Akbari; Aaron Fenster; Peter Nieh
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2012-02-16

6.  Accuracy Evaluation of a 3D Ultrasound-guided Biopsy System.

Authors:  Walter J Wooten; Jonathan A Nye; David M Schuster; Peter T Nieh; Viraj A Master; John R Votaw; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-03-14

7.  Random Walk Based Segmentation for the Prostate on 3D Transrectal Ultrasound Images.

Authors:  Ling Ma; Rongrong Guo; Zhiqiang Tian; Rajesh Venkataraman; Saradwata Sarkar; Xiabi Liu; Peter T Nieh; Viraj V Master; David M Schuster; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-18

8.  Multi-atlas-based Segmentation of the Parotid Glands of MR Images in Patients Following Head-and-neck Cancer Radiotherapy.

Authors:  Guanghui Cheng; Xiaofeng Yang; Ning Wu; Zhijian Xu; Hongfu Zhao; Yuefeng Wang; Tian Liu
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-02-28

9.  Deeply supervised 3D fully convolutional networks with group dilated convolution for automatic MRI prostate segmentation.

Authors:  Bo Wang; Yang Lei; Sibo Tian; Tonghe Wang; Yingzi Liu; Pretesh Patel; Ashesh B Jani; Hui Mao; Walter J Curran; Tian Liu; Xiaofeng Yang
Journal:  Med Phys       Date:  2019-02-19       Impact factor: 4.071

10.  Detection of Cancer Metastasis Using a Novel Macroscopic Hyperspectral Method.

Authors:  Hamed Akbari; Luma V Halig; Hongzheng Zhang; Dongsheng Wang; Zhuo Georgia Chen; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2012-03-23
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