Literature DB >> 23256080

A survey of GPU-based medical image computing techniques.

Lin Shi1, Wen Liu, Heye Zhang, Yongming Xie, Defeng Wang.   

Abstract

Medical imaging currently plays a crucial role throughout the entire clinical applications from medical scientific research to diagnostics and treatment planning. However, medical imaging procedures are often computationally demanding due to the large three-dimensional (3D) medical datasets to process in practical clinical applications. With the rapidly enhancing performances of graphics processors, improved programming support, and excellent price-to-performance ratio, the graphics processing unit (GPU) has emerged as a competitive parallel computing platform for computationally expensive and demanding tasks in a wide range of medical image applications. The major purpose of this survey is to provide a comprehensive reference source for the starters or researchers involved in GPU-based medical image processing. Within this survey, the continuous advancement of GPU computing is reviewed and the existing traditional applications in three areas of medical image processing, namely, segmentation, registration and visualization, are surveyed. The potential advantages and associated challenges of current GPU-based medical imaging are also discussed to inspire future applications in medicine.

Keywords:  Graphics processing unit (GPU); high-performance computing; image registration; image segmentation; image visualization

Year:  2012        PMID: 23256080      PMCID: PMC3496509          DOI: 10.3978/j.issn.2223-4292.2012.08.02

Source DB:  PubMed          Journal:  Quant Imaging Med Surg        ISSN: 2223-4306


  40 in total

1.  Survey: interpolation methods in medical image processing.

Authors:  T M Lehmann; C Gönner; K Spitzer
Journal:  IEEE Trans Med Imaging       Date:  1999-11       Impact factor: 10.048

Review 2.  A survey of medical image registration on graphics hardware.

Authors:  O Fluck; C Vetter; W Wein; A Kamen; B Preim; R Westermann
Journal:  Comput Methods Programs Biomed       Date:  2010-11-26       Impact factor: 5.428

3.  Automatic registration of portal images and volumetric CT for patient positioning in radiation therapy.

Authors:  Ali Khamene; Peter Bloch; Wolfgang Wein; Michelle Svatos; Frank Sauer
Journal:  Med Image Anal       Date:  2005-09-08       Impact factor: 8.545

4.  Performance evaluation of image processing algorithms on the GPU.

Authors:  Daniel Castaño-Díez; Dominik Moser; Andreas Schoenegger; Sabine Pruggnaller; Achilleas S Frangakis
Journal:  J Struct Biol       Date:  2008-07-24       Impact factor: 2.867

5.  Parallel computation of mutual information on the GPU with application to real-time registration of 3D medical images.

Authors:  Ramtin Shams; Parastoo Sadeghi; Rodney Kennedy; Richard Hartley
Journal:  Comput Methods Programs Biomed       Date:  2009-12-09       Impact factor: 5.428

6.  Seeded ND medical image segmentation by cellular automaton on GPU.

Authors:  Claude Kauffmann; Nicolas Piché
Journal:  Int J Comput Assist Radiol Surg       Date:  2009-08-01       Impact factor: 2.924

7.  Robust adaptive 3-D segmentation of vessel laminae from fluorescence confocal microscope images and parallel GPU implementation.

Authors:  Arunachalam Narayanaswamy; Saritha Dwarakapuram; Christopher S Bjornsson; Barbara M Cutler; William Shain; Badrinath Roysam
Journal:  IEEE Trans Med Imaging       Date:  2010-03       Impact factor: 10.048

8.  Scalable and interactive segmentation and visualization of neural processes in EM datasets.

Authors:  Won-Ki Jeong; Johanna Beyer; Markus Hadwiger; Amelio Vazquez; Hanspeter Pfister; Ross T Whitaker
Journal:  IEEE Trans Vis Comput Graph       Date:  2009 Nov-Dec       Impact factor: 4.579

9.  2D-3D registration of coronary angiograms for cardiac procedure planning and guidance.

Authors:  Guy-Anne Turgeon; Glen Lehmann; Gerard Guiraudon; Maria Drangova; David Holdsworth; Terry Peters
Journal:  Med Phys       Date:  2005-12       Impact factor: 4.071

10.  True 4D Image Denoising on the GPU.

Authors:  Anders Eklund; Mats Andersson; Hans Knutsson
Journal:  Int J Biomed Imaging       Date:  2011-10-01
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  12 in total

1.  Recent advances in surgical planning & navigation for tumor biopsy and resection.

Authors:  Defeng Wang; Diya Ma; Matthew Lun Wong; Yì Xiáng J Wáng
Journal:  Quant Imaging Med Surg       Date:  2015-10

2.  GPU accelerated segmentation and centerline extraction of tubular structures from medical images.

Authors:  Erik Smistad; Anne C Elster; Frank Lindseth
Journal:  Int J Comput Assist Radiol Surg       Date:  2013-11-01       Impact factor: 2.924

Review 3.  A survey of GPU-based acceleration techniques in MRI reconstructions.

Authors:  Haifeng Wang; Hanchuan Peng; Yuchou Chang; Dong Liang
Journal:  Quant Imaging Med Surg       Date:  2018-03

4.  Toward real-time availability of 3D temperature maps created with temporally constrained reconstruction.

Authors:  Nick Todd; Jaya Prakash; Henrik Odéen; Josh de Bever; Allison Payne; Phaneendra Yalavarthy; Dennis L Parker
Journal:  Magn Reson Med       Date:  2013-05-13       Impact factor: 4.668

5.  The Utility of Cloud Computing in Analyzing GPU-Accelerated Deformable Image Registration of CT and CBCT Images in Head and Neck Cancer Radiation Therapy.

Authors:  George Zaki; William Plishker; Wen Li; Junghoon Lee; Harry Quon; John Wong; Raj Shekhar
Journal:  IEEE J Transl Eng Health Med       Date:  2016-08-17       Impact factor: 3.316

6.  GPU-accelerated compartmental modeling analysis of DCE-MRI data from glioblastoma patients treated with bevacizumab.

Authors:  Yu-Han H Hsu; Ziyin Huang; Gregory Z Ferl; Chee M Ng
Journal:  PLoS One       Date:  2015-03-18       Impact factor: 3.240

7.  Accelerating Neuroimage Registration through Parallel Computation of Similarity Metric.

Authors:  Yun-Gang Luo; Ping Liu; Lin Shi; Yishan Luo; Lei Yi; Ang Li; Jing Qin; Pheng-Ann Heng; Defeng Wang
Journal:  PLoS One       Date:  2015-09-09       Impact factor: 3.240

8.  Survey statistics of automated segmentations applied to optical imaging of mammalian cells.

Authors:  Peter Bajcsy; Antonio Cardone; Joe Chalfoun; Michael Halter; Derek Juba; Marcin Kociolek; Michael Majurski; Adele Peskin; Carl Simon; Mylene Simon; Antoine Vandecreme; Mary Brady
Journal:  BMC Bioinformatics       Date:  2015-10-15       Impact factor: 3.169

Review 9.  Enabling large-scale biomedical analysis in the cloud.

Authors:  Ying-Chih Lin; Chin-Sheng Yu; Yen-Jen Lin
Journal:  Biomed Res Int       Date:  2013-10-31       Impact factor: 3.411

10.  Imalytics Preclinical: Interactive Analysis of Biomedical Volume Data.

Authors:  Felix Gremse; Marius Stärk; Josef Ehling; Jan Robert Menzel; Twan Lammers; Fabian Kiessling
Journal:  Theranostics       Date:  2016-01-01       Impact factor: 11.556

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