Literature DB >> 20118938

Human PRP4 kinase is required for stable tri-snRNP association during spliceosomal B complex formation.

Marc Schneider1, He-Hsuan Hsiao, Cindy L Will, Régis Giet, Henning Urlaub, Reinhard Lührmann.   

Abstract

Reversible protein phosphorylation has an essential role during pre-mRNA splicing. Here we identify two previously unidentified phosphoproteins in the human spliceosomal B complex, namely the pre-mRNA processing factors PRP6 and PRP31, both components of the U4/U6-U5 tri-small nuclear ribonucleoprotein (snRNP). We provide evidence that PRP6 and PRP31 are directly phosphorylated by human PRP4 kinase (PRP4K) concomitant with their incorporation into B complexes. Immunodepletion and complementation studies with HeLa splicing extracts revealed that active human PRP4K is required for the phosphorylation of PRP6 and PRP31 and for the assembly of stable, functional B complexes. Thus, the phosphorylation of PRP6 and PRP31 is likely to have a key role during spliceosome assembly. Our data provide new insights into the molecular mechanism by which PRP4K contributes to splicing. They further indicate that numerous phosphorylation events contribute to spliceosome assembly and, thus, that splicing can potentially be modulated at multiple regulatory checkpoints.

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Year:  2010        PMID: 20118938     DOI: 10.1038/nsmb.1718

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  48 in total

1.  Fission yeast Prp4p kinase regulates pre-mRNA splicing by phosphorylating a non-SR-splicing factor.

Authors:  W Schwelnus; K Richert; F Opitz; T Gross; Y Habara; T Tani; N F Käufer
Journal:  EMBO Rep       Date:  2001-01       Impact factor: 8.807

2.  Ser/Thr-specific protein phosphatases are required for both catalytic steps of pre-mRNA splicing.

Authors:  J E Mermoud; P Cohen; A I Lamond
Journal:  Nucleic Acids Res       Date:  1992-10-25       Impact factor: 16.971

Review 3.  SR proteins and splicing control.

Authors:  J L Manley; R Tacke
Journal:  Genes Dev       Date:  1996-07-01       Impact factor: 11.361

4.  Phosphorylation of spliceosomal protein SAP 155 coupled with splicing catalysis.

Authors:  C Wang; K Chua; W Seghezzi; E Lees; O Gozani; R Reed
Journal:  Genes Dev       Date:  1998-05-15       Impact factor: 11.361

5.  Gel electrophoretic isolation of splicing complexes containing U1 small nuclear ribonucleoprotein particles.

Authors:  M Zillmann; M L Zapp; S M Berget
Journal:  Mol Cell Biol       Date:  1988-02       Impact factor: 4.272

Review 6.  Multiple genetic and biochemical interactions of Brr2, Prp8, Prp31, Prp1 and Prp4 kinase suggest a function in the control of the activation of spliceosomes in Schizosaccharomyces pombe.

Authors:  Claudia A Bottner; Henning Schmidt; Sven Vogel; Melanie Michele; Norbert F Käufer
Journal:  Curr Genet       Date:  2005-10-12       Impact factor: 3.886

7.  Thiophosphorylation of U1-70K protein inhibits pre-mRNA splicing.

Authors:  J Tazi; U Kornstädt; F Rossi; P Jeanteur; G Cathala; C Brunel; R Lührmann
Journal:  Nature       Date:  1993-05-20       Impact factor: 49.962

8.  Protein 61K, encoded by a gene (PRPF31) linked to autosomal dominant retinitis pigmentosa, is required for U4/U6*U5 tri-snRNP formation and pre-mRNA splicing.

Authors:  Olga V Makarova; Evgeny M Makarov; Sunbin Liu; Hans-Peter Vornlocher; Reinhard Lührmann
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

9.  Characterisation of human and murine snRNP proteins by two-dimensional gel electrophoresis and phosphopeptide analysis of U1-specific 70K protein variants.

Authors:  A Woppmann; T Patschinsky; P Bringmann; F Godt; R Lührmann
Journal:  Nucleic Acids Res       Date:  1990-08-11       Impact factor: 16.971

10.  Specific phosphorylation of SR proteins by mammalian DNA topoisomerase I.

Authors:  F Rossi; E Labourier; T Forné; G Divita; J Derancourt; J F Riou; E Antoine; G Cathala; C Brunel; J Tazi
Journal:  Nature       Date:  1996-05-02       Impact factor: 49.962

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  39 in total

1.  Semiquantitative proteomic analysis of the human spliceosome via a novel two-dimensional gel electrophoresis method.

Authors:  Dmitry E Agafonov; Jochen Deckert; Elmar Wolf; Peter Odenwälder; Sergey Bessonov; Cindy L Will; Henning Urlaub; Reinhard Lührmann
Journal:  Mol Cell Biol       Date:  2011-05-02       Impact factor: 4.272

Review 2.  Spliceosome structure and function.

Authors:  Cindy L Will; Reinhard Lührmann
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-07-01       Impact factor: 10.005

3.  Diversity, classification and function of the plant protein kinase superfamily.

Authors:  Melissa D Lehti-Shiu; Shin-Han Shiu
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-09-19       Impact factor: 6.237

4.  Phosphorylation by Prp4 kinase releases the self-inhibition of FgPrp31 in Fusarium graminearum.

Authors:  Xuli Gao; Ju Zhang; Chaoni Song; Kangyi Yuan; Jianhua Wang; Qiaojun Jin; Jin-Rong Xu
Journal:  Curr Genet       Date:  2018-04-18       Impact factor: 3.886

5.  Evaluation of cancer dependence and druggability of PRP4 kinase using cellular, biochemical, and structural approaches.

Authors:  Qiang Gao; Ingrid Mechin; Nayantara Kothari; Zhuyan Guo; Gejing Deng; Kimberly Haas; Jessica McManus; Dietmar Hoffmann; Anlai Wang; Dmitri Wiederschain; Jennifer Rocnik; Werngard Czechtizky; Xin Chen; Larry McLean; Heike Arlt; David Harper; Feng Liu; Tahir Majid; Vinod Patel; Christoph Lengauer; Carlos Garcia-Echeverria; Bailin Zhang; Hong Cheng; Marion Dorsch; Shih-Min A Huang
Journal:  J Biol Chem       Date:  2013-09-03       Impact factor: 5.157

6.  PRPF mutations are associated with generalized defects in spliceosome formation and pre-mRNA splicing in patients with retinitis pigmentosa.

Authors:  Goranka Tanackovic; Adriana Ransijn; Philippe Thibault; Sherif Abou Elela; Roscoe Klinck; Eliot L Berson; Benoit Chabot; Carlo Rivolta
Journal:  Hum Mol Genet       Date:  2011-03-05       Impact factor: 6.150

7.  Spliceostatin A inhibits spliceosome assembly subsequent to prespliceosome formation.

Authors:  Gabriel A Roybal; Melissa S Jurica
Journal:  Nucleic Acids Res       Date:  2010-06-06       Impact factor: 16.971

Review 8.  Modulating splicing with small molecular inhibitors of the spliceosome.

Authors:  Kerstin A Effenberger; Veronica K Urabe; Melissa S Jurica
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-07-21       Impact factor: 9.957

9.  hnRNP L and hnRNP A1 induce extended U1 snRNA interactions with an exon to repress spliceosome assembly.

Authors:  Ni-Ting Chiou; Ganesh Shankarling; Kristen W Lynch
Journal:  Mol Cell       Date:  2013-02-07       Impact factor: 17.970

10.  Human Testis Phosphoproteome Reveals Kinases as Potential Targets in Spermatogenesis and Testicular Cancer.

Authors:  Judit Castillo; Jaco C Knol; Cindy M Korver; Sander R Piersma; Thang V Pham; Richard R de Goeij-de Haas; Ans M M van Pelt; Connie R Jimenez; Bastiaan J H Jansen
Journal:  Mol Cell Proteomics       Date:  2019-01-25       Impact factor: 5.911

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