Literature DB >> 2011594

Calorimetric determination of the enthalpy change for the alpha-helix to coil transition of an alanine peptide in water.

J M Scholtz1, S Marqusee, R L Baldwin, E J York, J M Stewart, M Santoro, D W Bolen.   

Abstract

The enthalpy change (delta H) accompanying the alpha-helix to random coil transition in water has been determined calorimetrically for a 50-residue peptide of defined sequence that contains primarily alanine. The enthalpy of helix formation is one of the basic parameters needed to predict thermal unfolding curves for peptide helices and it provides a starting point for analysis of the peptide hydrogen bond. The experimental uncertainty in delta H reflects the fact that the transition curve is too broad to measure in its entirety, which precludes fitting the baselines directly. A lower limit for delta H of unfolding, 0.9 kcal/mol per residue, is given by assuming that the change in heat capacity (delta Cp) is zero, and allowing the baseline to intersect the transition curve at the lowest measured Cp value. Use of the van't Hoff equation plus least-squares fitting to determine a more probable baseline gives delta H = 1.3 kcal/mol per residue. Earlier studies of poly(L-lysine) and poly(L-glutamate) have given 1.1 kcal/mol per residue. Those investigations, along with our present result, suggest that the side chain has little effect on delta H. The possibility that the peptide hydrogen bond shows a correspondingly large delta H, and the implications for protein stability, are discussed.

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Year:  1991        PMID: 2011594      PMCID: PMC51338          DOI: 10.1073/pnas.88.7.2854

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  13 in total

1.  Thermodynamics of amide hydrogen bond formation in polar and apolar solvents.

Authors:  S F Sneddon; D J Tobias; C L Brooks
Journal:  J Mol Biol       Date:  1989-10-20       Impact factor: 5.469

2.  Relative helix-forming tendencies of nonpolar amino acids.

Authors:  S Padmanabhan; S Marqusee; T Ridgeway; T M Laue; R L Baldwin
Journal:  Nature       Date:  1990-03-15       Impact factor: 49.962

3.  Unusually stable helix formation in short alanine-based peptides.

Authors:  S Marqusee; V H Robbins; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1989-07       Impact factor: 11.205

4.  Comparison of alpha-helix stability in peptides having a negatively or positively charged residue block attached either to the N- or C-terminus of an alpha-helix: the electrostatic contribution and anisotropic stability of the alpha-helix.

Authors:  S Takahashi; E H Kim; T Hibino; T Ooi
Journal:  Biopolymers       Date:  1989-05       Impact factor: 2.505

5.  Derivative sspectroscopy applied to tyrosyl chromophores. Studies on ribonuclease, lima bean inhibitors, insulin, and pancreatic trypsin inhibitor.

Authors:  J F Brandts; L J Kaplan
Journal:  Biochemistry       Date:  1973-05-08       Impact factor: 3.162

6.  Thermodynamic parameters of helix-coil transitions in polypeptide chains.

Authors:  O B Ptitsyn
Journal:  Pure Appl Chem       Date:  1972       Impact factor: 2.453

7.  Calorimetric measurement of enthalpy change in the isothermal helix--coil transition of poly-L-lysine in aqueous solution.

Authors:  P Y Chou; H A Scheraga
Journal:  Biopolymers       Date:  1971       Impact factor: 2.505

8.  Calorimetric heat of the helix-coil transition of poly-L-glutamic acid.

Authors:  G Rialdi; J Hermans
Journal:  J Am Chem Soc       Date:  1966-12-20       Impact factor: 15.419

9.  Experimental free energy and enthalpy of formation of the alpha-helix.

Authors:  J Hermans
Journal:  J Phys Chem       Date:  1966-02

10.  Helix stabilization by Glu-...Lys+ salt bridges in short peptides of de novo design.

Authors:  S Marqusee; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

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  78 in total

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Authors:  S P Edgcomb; B M Baker; K P Murphy
Journal:  Protein Sci       Date:  2000-05       Impact factor: 6.725

Review 2.  Structural organization of G-protein-coupled receptors.

Authors:  A L Lomize; I D Pogozheva; H I Mosberg
Journal:  J Comput Aided Mol Des       Date:  1999-07       Impact factor: 3.686

3.  Interaction between water and polar groups of the helix backbone: an important determinant of helix propensities.

Authors:  P Luo; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

4.  The Flory isolated-pair hypothesis is not valid for polypeptide chains: implications for protein folding.

Authors:  R V Pappu; R Srinivasan; G D Rose
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-07       Impact factor: 11.205

5.  The unfolding enthalpy of the pH 4 molten globule of apomyoglobin measured by isothermal titration calorimetry.

Authors:  M Jamin; M Antalik; S N Loh; D W Bolen; R L Baldwin
Journal:  Protein Sci       Date:  2000-07       Impact factor: 6.725

6.  The enthalpy of the alanine peptide helix measured by isothermal titration calorimetry using metal-binding to induce helix formation.

Authors:  Maria M Lopez; Der-Hang Chin; Robert L Baldwin; George I Makhatadze
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-29       Impact factor: 11.205

7.  Helix formation via conformation diffusion search.

Authors:  Cheng-Yen Huang; Zelleka Getahun; Yongjin Zhu; Jason W Klemke; William F DeGrado; Feng Gai
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-26       Impact factor: 11.205

8.  Circular dichroism spectra of short, fixed-nucleus alanine helices.

Authors:  Der-Hang Chin; Robert W Woody; Carol A Rohl; Robert L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-11       Impact factor: 11.205

9.  Theory for protein folding cooperativity: helix bundles.

Authors:  Kingshuk Ghosh; K A Dill
Journal:  J Am Chem Soc       Date:  2009-02-18       Impact factor: 15.419

10.  Binding thermodynamics of the N-terminal peptide of the CCR5 coreceptor to HIV-1 envelope glycoprotein gp120.

Authors:  Evan T Brower; Arne Schön; Jeffrey C Klein; Ernesto Freire
Journal:  Biochemistry       Date:  2009-02-03       Impact factor: 3.162

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