Literature DB >> 11818561

The enthalpy of the alanine peptide helix measured by isothermal titration calorimetry using metal-binding to induce helix formation.

Maria M Lopez1, Der-Hang Chin, Robert L Baldwin, George I Makhatadze.   

Abstract

The goal of this study is to use the model system described earlier to make direct measurements of the enthalpy of helix formation at different temperatures. For this we studied model alanine peptides in which helix formation can be triggered by metal (La(3+)) binding. The heat of La(3+) interaction with the peptides at different temperatures is measured by isothermal titration calorimetry. Circular dichroism spectroscopy is used to follow helix formation. Peptides of increasing length (12-, 16-, and 19-aa residues) that contain a La(3+)-binding loop followed by helices of increasing length, are used to separate the heat of metal binding from the enthalpy of helix formation. We demonstrate that (i) the enthalpy of helix formation is -0.9 +/- 0.1 kcal/mol; (ii) the enthalpy of helix formation is independent of the peptide length; (iii) the enthalpy of helix formation does not depend significantly on temperature in the range from 5 to 45 degrees C, suggesting that the heat capacity change on helix formation is very small. Thus, the use of metal binding to induce helix formation has an enormous potential for measuring various thermodynamic properties of alpha-helices.

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Year:  2002        PMID: 11818561      PMCID: PMC122184          DOI: 10.1073/pnas.032665199

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  MEARA sequence repeat of human CstF-64 polyadenylation factor is helical in solution. A spectroscopic and calorimetric study.

Authors:  J M Richardson; K W McMahon; C C MacDonald; G I Makhatadze
Journal:  Biochemistry       Date:  1999-09-28       Impact factor: 3.162

2.  Interaction between water and polar groups of the helix backbone: an important determinant of helix propensities.

Authors:  P Luo; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

Review 3.  Is protein folding hierarchic? I. Local structure and peptide folding.

Authors:  R L Baldwin; G D Rose
Journal:  Trends Biochem Sci       Date:  1999-01       Impact factor: 13.807

4.  Interactions of the major cold shock protein of Bacillus subtilis CspB with single-stranded DNA templates of different base composition.

Authors:  M M Lopez; K Yutani; G I Makhatadze
Journal:  J Biol Chem       Date:  1999-11-19       Impact factor: 5.157

5.  Energetics of target peptide binding by calmodulin reveals different modes of binding.

Authors:  R D Brokx; M M Lopez; H J Vogel; G I Makhatadze
Journal:  J Biol Chem       Date:  2001-01-29       Impact factor: 5.157

6.  The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain.

Authors:  L PAULING; R B COREY; H R BRANSON
Journal:  Proc Natl Acad Sci U S A       Date:  1951-04       Impact factor: 11.205

7.  A 1H NMR determination of the solution conformation of a synthetic peptide analogue of calcium-binding site III of rabbit skeletal troponin C.

Authors:  B J Marsden; R S Hodges; B D Sykes
Journal:  Biochemistry       Date:  1989-10-31       Impact factor: 3.162

8.  Calorimetric measurement of enthalpy change in the isothermal helix--coil transition of poly-L-lysine in aqueous solution.

Authors:  P Y Chou; H A Scheraga
Journal:  Biopolymers       Date:  1971       Impact factor: 2.505

9.  Calorimetric heat of the helix-coil transition of poly-L-glutamic acid.

Authors:  G Rialdi; J Hermans
Journal:  J Am Chem Soc       Date:  1966-12-20       Impact factor: 15.419

10.  Energetics of the interaction between water and the helical peptide group and its role in determining helix propensities.

Authors:  F Avbelj; P Luo; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  2000-09-26       Impact factor: 11.205

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  26 in total

1.  Circular dichroism spectra of short, fixed-nucleus alanine helices.

Authors:  Der-Hang Chin; Robert W Woody; Carol A Rohl; Robert L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-11       Impact factor: 11.205

2.  Equilibrium structure and folding of a helix-forming peptide: circular dichroism measurements and replica-exchange molecular dynamics simulations.

Authors:  Gouri S Jas; Krzysztof Kuczera
Journal:  Biophys J       Date:  2004-08-31       Impact factor: 4.033

3.  Simulation of the folding equilibrium of alpha-helical peptides: a comparison of the generalized Born approximation with explicit solvent.

Authors:  Hugh Nymeyer; Angel E García
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-14       Impact factor: 11.205

4.  Exploring Flory's isolated-pair hypothesis: statistical mechanics of helix-coil transitions in polyalanine and the C-peptide from RNase A.

Authors:  Y Zenmei Ohkubo; Charles L Brooks
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

Review 5.  Membrane protein folding: how important are hydrogen bonds?

Authors:  James U Bowie
Journal:  Curr Opin Struct Biol       Date:  2010-11-12       Impact factor: 6.809

6.  Enthalpy of helix-coil transition: missing link in rationalizing the thermodynamics of helix-forming propensities of the amino acid residues.

Authors:  John M Richardson; Maria M Lopez; George I Makhatadze
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-25       Impact factor: 11.205

7.  The polyproline II conformation in short alanine peptides is noncooperative.

Authors:  Kang Chen; Zhigang Liu; Neville R Kallenbach
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-15       Impact factor: 11.205

8.  Simulations of the pressure and temperature unfolding of an alpha-helical peptide.

Authors:  Dietmar Paschek; S Gnanakaran; Angel E Garcia
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-30       Impact factor: 11.205

9.  End-to-end distance distributions and intrachain diffusion constants in unfolded polypeptide chains indicate intramolecular hydrogen bond formation.

Authors:  Andreas Möglich; Karin Joder; Thomas Kiefhaber
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-07       Impact factor: 11.205

10.  Nucleation and stability of hydrogen-bond surrogate-based alpha-helices.

Authors:  Deyun Wang; Kang Chen; Gianluca Dimartino; Paramjit S Arora
Journal:  Org Biomol Chem       Date:  2006-11-21       Impact factor: 3.876

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