Literature DB >> 20109157

Pupylation versus ubiquitylation: tagging for proteasome-dependent degradation.

Kristin E Burns1, K Heran Darwin.   

Abstract

Prokaryotic ubiquitin-like protein (Pup) is the first identified prokaryotic protein that is functionally analogous to ubiquitin. Despite using the proteasome as the end-point for proteolysis, Pup differs from ubiquitin both biochemically and structurally. We will discuss these differences that have been highlighted by several recent studies. Finally, we will speculate on the possible interactions between the two analogous pathways in pathogen and host.

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Year:  2010        PMID： 20109157      PMCID： PMC3647454          DOI： 10.1111/j.1462-5822.2010.01447.x

Source DB:  PubMed          Journal:  Cell Microbiol        ISSN： 1462-5814            Impact factor:   3.715


  60 in total

1.  Characterization of the 20S proteasome from the actinomycete Frankia.

Authors:  M N Pouch; B Cournoyer; W Baumeister
Journal:  Mol Microbiol       Date:  2000-01       Impact factor: 3.501

Review 2.  The ubiquitin-proteasome pathway and pathogenesis of human diseases.

Authors:  A L Schwartz; A Ciechanover
Journal:  Annu Rev Med       Date:  1999       Impact factor: 13.739

3.  The N-terminal coiled coil of the Rhodococcus erythropolis ARC AAA ATPase is neither necessary for oligomerization nor nucleotide hydrolysis.

Authors:  Xujia Zhang; Katinka Stoffels; Stephanie Wurzbacher; Geert Schoofs; Günter Pfeifer; Tisha Banerjee; Annabel H A Parret; Wolfgang Baumeister; René De Mot; Peter Zwickl
Journal:  J Struct Biol       Date:  2004 Apr-May       Impact factor: 2.867

Review 4.  Principles of ubiquitin and SUMO modifications in DNA repair.

Authors:  Steven Bergink; Stefan Jentsch
Journal:  Nature       Date:  2009-03-26       Impact factor: 49.962

5.  Turnover of endogenous SsrA-tagged proteins mediated by ATP-dependent proteases in Escherichia coli.

Authors:  Mark Lies; Michael R Maurizi
Journal:  J Biol Chem       Date:  2008-06-12       Impact factor: 5.157

6.  Characterization of a Mycobacterium tuberculosis proteasomal ATPase homologue.

Authors:  K Heran Darwin; Gang Lin; Zhiqiang Chen; Huilin Li; Carl F Nathan
Journal:  Mol Microbiol       Date:  2005-01       Impact factor: 3.501

7.  Identification of substrates of the Mycobacterium tuberculosis proteasome.

Authors:  Michael J Pearce; Pooja Arora; Richard A Festa; Susan M Butler-Wu; Rajesh S Gokhale; K Heran Darwin
Journal:  EMBO J       Date:  2006-11-02       Impact factor: 11.598

8.  Prediction and functional analysis of native disorder in proteins from the three kingdoms of life.

Authors:  J J Ward; J S Sodhi; L J McGuffin; B F Buxton; D T Jones
Journal:  J Mol Biol       Date:  2004-03-26       Impact factor: 5.469

Review 9.  Recognition and processing of ubiquitin-protein conjugates by the proteasome.

Authors:  Daniel Finley
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

10.  The yeast ubiquitin genes: a family of natural gene fusions.

Authors:  E Ozkaynak; D Finley; M J Solomon; A Varshavsky
Journal:  EMBO J       Date:  1987-05       Impact factor: 11.598
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  23 in total

1.  Ubiquitination: Added complexity in Ras and Rho family GTPase function.

Authors:  Michelle de la Vega; James F Burrows; James A Johnston
Journal:  Small GTPases       Date:  2011-07-01

Review 2.  Context-dependent resistance to proteolysis of intrinsically disordered proteins.

Authors:  Marcin J Suskiewicz; Joel L Sussman; Israel Silman; Yosef Shaul
Journal:  Protein Sci       Date:  2011-06-08       Impact factor: 6.725

3.  Mycobacterium tuberculosis prokaryotic ubiquitin-like protein-deconjugating enzyme is an unusual aspartate amidase.

Authors:  Kristin E Burns; Fiona E McAllister; Carsten Schwerdtfeger; Julian Mintseris; Francisca Cerda-Maira; Elke E Noens; Matthias Wilmanns; Stevan R Hubbard; Francesco Melandri; Huib Ovaa; Steven P Gygi; K Heran Darwin
Journal:  J Biol Chem       Date:  2012-08-31       Impact factor: 5.157

4.  Selective Phenylimidazole-Based Inhibitors of the Mycobacterium tuberculosis Proteasome.

Authors:  Wenhu Zhan; Hao-Chi Hsu; Trevor Morgan; Tierra Ouellette; Kristin Burns-Huang; Ryoma Hara; Adrian G Wright; Toshihiro Imaeda; Rei Okamoto; Kenjiro Sato; Mayako Michino; Manoj Ramjee; Kazuyoshi Aso; Peter T Meinke; Michael Foley; Carl F Nathan; Huilin Li; Gang Lin
Journal:  J Med Chem       Date:  2019-10-15       Impact factor: 7.446

Review 5.  Proteasomes and protein conjugation across domains of life.

Authors:  Julie Maupin-Furlow
Journal:  Nat Rev Microbiol       Date:  2011-12-19       Impact factor: 60.633

Review 6.  Ubiquitin-like proteins and their roles in archaea.

Authors:  Julie A Maupin-Furlow
Journal:  Trends Microbiol       Date:  2012-11-08       Impact factor: 17.079

7.  The Absence of Pupylation (Prokaryotic Ubiquitin-Like Protein Modification) Affects Morphological and Physiological Differentiation in Streptomyces coelicolor.

Authors:  Hasna Boubakri; Nicolas Seghezzi; Magalie Duchateau; Myriam Gominet; Olga Kofroňová; Oldřich Benada; Philippe Mazodier; Jean-Luc Pernodet
Journal:  J Bacteriol       Date:  2015-08-17       Impact factor: 3.490

Review 8.  Prokaryotic ubiquitin-like protein modification.

Authors:  Julie A Maupin-Furlow
Journal:  Annu Rev Microbiol       Date:  2014-05-29       Impact factor: 15.500

Review 9.  Deubiquitinating enzymes as promising drug targets for infectious diseases.

Authors:  Bindu Nanduri; Akamol E Suvarnapunya; Malabi Venkatesan; Mariola J Edelmann
Journal:  Curr Pharm Des       Date:  2013       Impact factor: 3.116

10.  Allosteric transitions direct protein tagging by PafA, the prokaryotic ubiquitin-like protein (Pup) ligase.

Authors:  Naomi Ofer; Nadav Forer; Maayan Korman; Marina Vishkautzan; Isam Khalaila; Eyal Gur
Journal:  J Biol Chem       Date:  2013-03-07       Impact factor: 5.157
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