Literature DB >> 20090211

A comprehensive, sensitive and economical approach for the detection of mutations in the RB1 gene in retinoblastoma.

Vidya Latha Parsam1, Chitra Kannabiran, Santosh Honavar, Geeta K Vemuganti, Mohammad Javed Ali.   

Abstract

Retinoblastoma (Rb) is the most common primary intraocular malignancy in children. It is brought about by the mutational inactivation of both alleles of RB1 gene in the developing retina. To identify the RB1 mutations, we analysed 74 retinoblastoma patients by screening the exons and the promoter region of RB1. The strategy used was to detect large deletions/duplications by fluorescent quantitative multiplex PCR; small deletions/insertions by fluorescent genotyping of RB1 alleles, and point mutations by PCR-RFLP and sequencing. Genomic DNA from the peripheral blood leucocytes of 74 Rb patients (53 with bilateral Rb, 21 with unilateral Rb; 4 familial cases) was screened for mutations. Recurrent mutations were identified in five patients with bilateral Rb, large deletions in 11 patients (nine with bilateral Rb and two with unilateral Rb), small deletions/insertions were found in 12 patients all with bilateral Rb, and point mutations in 26 patients (14 nonsense, six splice site, five substitution and one silent change). Three mutations were associated with variable expressivity of the disease in different family members. Using this method, the detection rates achieved in patients with bilateral Rb were 44/53 (83%) and with unilateral Rb, 5/21 (23.8%). This approach may be feasible for clinical genetic testing and counselling of patients.

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Year:  2009        PMID: 20090211     DOI: 10.1007/s12041-009-0069-z

Source DB:  PubMed          Journal:  J Genet        ISSN: 0022-1333            Impact factor:   1.166


  26 in total

1.  Screening for RB1 mutations in tumor tissue using denaturing high performance liquid chromatography, multiplex ligation-dependent probe amplification, and loss of heterozygosity analysis.

Authors:  Loryn N Sellner; Edward Edkins; Nicholas Smith
Journal:  Pediatr Dev Pathol       Date:  2006-04-04

2.  Spectrum of germline RB1 gene mutations in Spanish retinoblastoma patients: Phenotypic and molecular epidemiological implications.

Authors:  J Alonso; P García-Miguel; J Abelairas; M Mendiola; E Sarret; M T Vendrell; A Navajas; A Pestaña
Journal:  Hum Mutat       Date:  2001-05       Impact factor: 4.878

Review 3.  One hit, two hits, three hits, more? Genomic changes in the development of retinoblastoma.

Authors:  Timothy W Corson; Brenda L Gallie
Journal:  Genes Chromosomes Cancer       Date:  2007-07       Impact factor: 5.006

4.  Constitutional and somatic RB1 mutation spectrum in nonfamilial unilateral and bilateral retinoblastoma in India.

Authors:  M N Bamne; P N Ghule; J Jose; S D Banavali; P A Kurkure; P S Amare Kadam
Journal:  Genet Test       Date:  2005

5.  Frequent constitutional C to T mutations in CGA-arginine codons in the RB1 gene produce premature stop codons in patients with bilateral (hereditary) retinoblastoma.

Authors:  J K Cowell; T Smith; B Bia
Journal:  Eur J Hum Genet       Date:  1994       Impact factor: 4.246

6.  Detection of mutations of the RB1 gene in retinoblastoma patients by using exon-by-exon PCR-SSCP analysis.

Authors:  T Shimizu; J Toguchida; M V Kato; A Kaneko; K Ishizaki; M S Sasaki
Journal:  Am J Hum Genet       Date:  1994-05       Impact factor: 11.025

7.  Mutation and cancer: statistical study of retinoblastoma.

Authors:  A G Knudson
Journal:  Proc Natl Acad Sci U S A       Date:  1971-04       Impact factor: 11.205

8.  Preimplantation genetic diagnosis for retinoblastoma: the first reported liveborn.

Authors:  Kangpu Xu; Zev Rosenwaks; Katherine Beaverson; Ina Cholst; Lucinda Veeck; David H Abramson
Journal:  Am J Ophthalmol       Date:  2004-01       Impact factor: 5.258

9.  Germline mutations in the RB1 gene in patients with hereditary retinoblastoma.

Authors:  Z Liu; Y Song; B Bia; J K Cowell
Journal:  Genes Chromosomes Cancer       Date:  1995-12       Impact factor: 5.006

10.  A human DNA segment with properties of the gene that predisposes to retinoblastoma and osteosarcoma.

Authors:  S H Friend; R Bernards; S Rogelj; R A Weinberg; J M Rapaport; D M Albert; T P Dryja
Journal:  Nature       Date:  1986 Oct 16-22       Impact factor: 49.962

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  15 in total

1.  Splicing aberrations caused by constitutional RB1 gene mutations in retinoblastoma.

Authors:  Vidya Latha Parsam; Mohammed Javed Ali; Santosh G Honavar; Geeta K Vemuganti; Chitra Kannabiran
Journal:  J Biosci       Date:  2011-06       Impact factor: 1.826

2.  Mutational analysis of the RB1 gene and the inheritance patterns of retinoblastoma in Jordan.

Authors:  Yacoub A Yousef; Abdelghani Tbakhi; Maysa Al-Hussaini; Ibrahim AlNawaiseh; Ala Saab; Amal Afifi; Maysa Naji; Mona Mohammad; Rasha Deebajah; Imad Jaradat; Iyad Sultan; Mustafa Mehyar
Journal:  Fam Cancer       Date:  2018-04       Impact factor: 2.375

3.  Genetic screening in Iranian patients with retinoblastoma.

Authors:  K Shahraki; A Ahani; P Sharma; M Faranoush; G Bahoush; I Torktaz; W A Gahl; M Naseripour; B Behnam
Journal:  Eye (Lond)       Date:  2016-12-16       Impact factor: 3.775

4.  Epidemiology and Rb1 gene of retinoblastoma.

Authors:  Jun Yun; Yang Li; Chang-Tai Xu; Bo-Rong Pan
Journal:  Int J Ophthalmol       Date:  2011-02-18       Impact factor: 1.779

5.  A stepwise strategy for rapid and cost-effective RB1 screening in Indian retinoblastoma patients.

Authors:  Kannan Thirumalairaj; Aloysius Abraham; Bharanidharan Devarajan; Namrata Gaikwad; Usha Kim; Veerappan Muthukkaruppan; Ayyasamy Vanniarajan
Journal:  J Hum Genet       Date:  2015-06-18       Impact factor: 3.172

6.  Orbital retinoblastoma: Present status and future challenges - A review.

Authors:  Mohammad J Ali; Santosh G Honavar; Vijay A P Reddy
Journal:  Saudi J Ophthalmol       Date:  2010-10-13

7.  RB1 gene mutations in retinoblastoma and its clinical correlation.

Authors:  Mohammad Javed Ali; Vidya Latha Parsam; Santosh G Honavar; Chitra Kannabiran; Geeta K Vemuganti; Vijay Anand P Reddy
Journal:  Saudi J Ophthalmol       Date:  2010-02-06

Review 8.  Genetics of primary intraocular tumors.

Authors:  Nisha Nagarkatti-Gude; Yujuan Wang; Mohammad Javed Ali; Santosh G Honavar; Martine J Jager; Chi-Chao Chan
Journal:  Ocul Immunol Inflamm       Date:  2012-08       Impact factor: 3.070

9.  Clinical evaluation of RB1 genetic testing reveals novel mutations in Vietnamese patients with retinoblastoma.

Authors:  Chinh Quoc Hoang; Hong-Quan Duong; Nguyen Thanh Nguyen; Sy Anh Hao Nguyen; Cuong Nguyen; Bo Duy Nguyen; Lan Tuyet Phung; Dung Thuy Nguyen; Chau Thi Minh Pham; Trang Le Doan; Mai Hoang Tran
Journal:  Mol Clin Oncol       Date:  2021-07-03

10.  Familial retinoblastoma due to intronic LINE-1 insertion causes aberrant and noncanonical mRNA splicing of the RB1 gene.

Authors:  Carlos Rodríguez-Martín; Florencia Cidre; Ana Fernández-Teijeiro; Gema Gómez-Mariano; Leticia de la Vega; Patricia Ramos; Ángel Zaballos; Sara Monzón; Javier Alonso
Journal:  J Hum Genet       Date:  2016-01-14       Impact factor: 3.172

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