Literature DB >> 20086187

The RAD23 family provides an essential connection between the 26S proteasome and ubiquitylated proteins in Arabidopsis.

Lisa M Farmer1, Adam J Book, Kwang-Hee Lee, Ya-Ling Lin, Hongyong Fu, Richard D Vierstra.   

Abstract

The ubiquitin (Ub)/26S proteasome system (UPS) directs the turnover of numerous regulatory proteins, thereby exerting control over many aspects of plant growth, development, and survival. The UPS is directed in part by a group of Ub-like/Ub-associated (UBL/UBA) proteins that help shuttle ubiquitylated proteins to the 26S proteasome for breakdown. Here, we describe the collection of UBL/UBA proteins in Arabidopsis thaliana, including four isoforms that comprise the RADIATION SENSITIVE23 (RAD23) family. The nuclear-enriched RAD23 proteins bind Ub conjugates, especially those linked internally through Lys-48, via their UBA domains, and associate with the 26S proteasome Ub receptor RPN10 via their N-terminal UBL domains. Whereas homozygous mutants individually affecting the four RAD23 genes are without phenotypic consequences (rad23a, rad23c, and rad23d) or induce mild phyllotaxy and sterility defects (rad23b), higher-order mutant combinations generate severely dwarfed plants, with the quadruple mutant displaying reproductive lethality. Both the synergistic effects of a rad23b-1 rpn10-1 combination and the response of rad23b plants to mitomycin C suggest that RAD23b regulates cell division. Taken together, RAD23 proteins appear to play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS substrates to the 26S proteasome.

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Year:  2010        PMID: 20086187      PMCID: PMC2828702          DOI: 10.1105/tpc.109.072660

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  71 in total

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Journal:  Plant Cell       Date:  2001-07       Impact factor: 11.277

Review 2.  Protein degradation: recognition of ubiquitinylated substrates.

Authors:  Rasmus Hartmann-Petersen; Colin Gordon
Journal:  Curr Biol       Date:  2004-09-21       Impact factor: 10.834

3.  Degradation of the cyclin-dependent kinase inhibitor KRP1 is regulated by two different ubiquitin E3 ligases.

Authors:  Hong Ren; Aaron Santner; Juan Carlos del Pozo; James A H Murray; Mark Estelle
Journal:  Plant J       Date:  2007-11-14       Impact factor: 6.417

4.  The AIP2 E3 ligase acts as a novel negative regulator of ABA signaling by promoting ABI3 degradation.

Authors:  Xiuren Zhang; Virginia Garreton; Nam-Hai Chua
Journal:  Genes Dev       Date:  2005-07-01       Impact factor: 11.361

5.  Rad23 is required for transcription-coupled repair and efficient overrall repair in Saccharomyces cerevisiae.

Authors:  J P Mueller; M J Smerdon
Journal:  Mol Cell Biol       Date:  1996-05       Impact factor: 4.272

6.  Tandem affinity purification and mass spectrometric analysis of ubiquitylated proteins in Arabidopsis.

Authors:  Scott A Saracco; Maria Hansson; Mark Scalf; Joseph M Walker; Lloyd M Smith; Richard D Vierstra
Journal:  Plant J       Date:  2009-03-09       Impact factor: 6.417

7.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

Review 8.  Recognition and processing of ubiquitin-protein conjugates by the proteasome.

Authors:  Daniel Finley
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

9.  NUCLEAR PORE ANCHOR, the Arabidopsis homolog of Tpr/Mlp1/Mlp2/megator, is involved in mRNA export and SUMO homeostasis and affects diverse aspects of plant development.

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Journal:  Plant Cell       Date:  2007-05-18       Impact factor: 11.277

10.  The PINHEAD/ZWILLE gene acts pleiotropically in Arabidopsis development and has overlapping functions with the ARGONAUTE1 gene.

Authors:  K Lynn; A Fernandez; M Aida; J Sedbrook; M Tasaka; P Masson; M K Barton
Journal:  Development       Date:  1999-02       Impact factor: 6.868

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  44 in total

Review 1.  The expanding universe of ubiquitin and ubiquitin-like modifiers.

Authors:  Richard D Vierstra
Journal:  Plant Physiol       Date:  2012-06-12       Impact factor: 8.340

2.  Arabidopsis membrane-anchored ubiquitin-fold (MUB) proteins localize a specific subset of ubiquitin-conjugating (E2) enzymes to the plasma membrane.

Authors:  Rebecca T Dowil; Xiaolong Lu; Scott A Saracco; Richard D Vierstra; Brian P Downes
Journal:  J Biol Chem       Date:  2011-02-23       Impact factor: 5.157

3.  The ubiquitination machinery of the ubiquitin system.

Authors:  Judy Callis
Journal:  Arabidopsis Book       Date:  2014-10-06

4.  The U-Box/ARM E3 ligase PUB13 regulates cell death, defense, and flowering time in Arabidopsis.

Authors:  Wei Li; Il-Pyung Ahn; Yuese Ning; Chan-Ho Park; Lirong Zeng; Justin G A Whitehill; Haibin Lu; Qingzhen Zhao; Bo Ding; Qi Xie; Jian-Min Zhou; Liangying Dai; Guo-Liang Wang
Journal:  Plant Physiol       Date:  2012-03-01       Impact factor: 8.340

Review 5.  Brassinosteroids: Multidimensional Regulators of Plant Growth, Development, and Stress Responses.

Authors:  Trevor M Nolan; Nemanja Vukašinović; Derui Liu; Eugenia Russinova; Yanhai Yin
Journal:  Plant Cell       Date:  2019-11-27       Impact factor: 11.277

6.  A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice.

Authors:  Shayne D Wierbowski; Tommy V Vo; Pascal Falter-Braun; Timothy O Jobe; Lars H Kruse; Xiaomu Wei; Jin Liang; Michael J Meyer; Nurten Akturk; Christen A Rivera-Erick; Nicolas A Cordero; Mauricio I Paramo; Elnur E Shayhidin; Marta Bertolotti; Nathaniel D Tippens; Kazi Akther; Rita Sharma; Yuichi Katayose; Kourosh Salehi-Ashtiani; Tong Hao; Pamela C Ronald; Joseph R Ecker; Peter A Schweitzer; Shoshi Kikuchi; Hiroshi Mizuno; David E Hill; Marc Vidal; Gaurav D Moghe; Susan R McCouch; Haiyuan Yu
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-12       Impact factor: 11.205

7.  The defective proteasome but not substrate recognition function is responsible for the null phenotypes of the Arabidopsis proteasome subunit RPN10.

Authors:  Ya-Ling Lin; Shu-Chiun Sung; Hwang-Long Tsai; Ting-Ting Yu; Ramalingam Radjacommare; Raju Usharani; Antony S Fatimababy; Hsia-Yin Lin; Ya-Ying Wang; Hongyong Fu
Journal:  Plant Cell       Date:  2011-07-15       Impact factor: 11.277

8.  Regulation of cell proliferation and migration by p62 through stabilization of Twist1.

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Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-09       Impact factor: 11.205

9.  Proteomes and Ubiquitylomes Analysis Reveals the Involvement of Ubiquitination in Protein Degradation in Petunias.

Authors:  Jianhang Guo; Juanxu Liu; Qian Wei; Rongmin Wang; Weiyuan Yang; Yueyue Ma; Guoju Chen; Yixun Yu
Journal:  Plant Physiol       Date:  2016-11-03       Impact factor: 8.340

10.  The Proteasome Stress Regulon Is Controlled by a Pair of NAC Transcription Factors in Arabidopsis.

Authors:  Nicholas P Gladman; Richard S Marshall; Kwang-Hee Lee; Richard D Vierstra
Journal:  Plant Cell       Date:  2016-05-18       Impact factor: 11.277

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