Literature DB >> 21345795

Arabidopsis membrane-anchored ubiquitin-fold (MUB) proteins localize a specific subset of ubiquitin-conjugating (E2) enzymes to the plasma membrane.

Rebecca T Dowil1, Xiaolong Lu, Scott A Saracco, Richard D Vierstra, Brian P Downes.   

Abstract

The covalent attachment of ubiquitin (Ub) to various intracellular proteins plays important roles in altering the function, localization, processing, and degradation of the modified target. A minimal ubiquitylation pathway uses a three-enzyme cascade (E1, E2, and E3) to activate Ub and select target proteins for modification. Although diverse E3 families provide much of the target specificity, several factors have emerged recently that coordinate the subcellular localization of the ubiquitylation machinery. Here, we show that the family of membrane-anchored ubiquitin-fold (MUB) proteins recruits and docks specific E2s to the plasma membrane. Protein interaction screens with Arabidopsis MUBs revealed that interacting E2s are limited to a well defined subgroup that is phylogenetically related to human UbcH5 and yeast Ubc4/5 families. MUBs appear to interact noncovalently with an E2 surface opposite the active site that forms a covalent linkage with Ub. Bimolecular fluorescence complementation demonstrated that MUBs bind simultaneously to the plasma membrane via a prenyl tail and to the E2 in planta. These findings suggest that MUBs contribute subcellular specificity to ubiquitylation by docking the conjugation machinery to the plasma membrane.

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Year:  2011        PMID: 21345795      PMCID: PMC3083199          DOI: 10.1074/jbc.M110.158808

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  55 in total

1.  The Saccharomyces cerevisiae peroxisomal import receptor Pex5p is monoubiquitinated in wild type cells.

Authors:  Astrid Kragt; Tineke Voorn-Brouwer; Marlene van den Berg; Ben Distel
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2.  Cell-free protein production and labeling protocol for NMR-based structural proteomics.

Authors:  Dmitriy A Vinarov; Betsy L Lytle; Francis C Peterson; Ejan M Tyler; Brian F Volkman; John L Markley
Journal:  Nat Methods       Date:  2004-10-21       Impact factor: 28.547

3.  Structural insights into E1-catalyzed ubiquitin activation and transfer to conjugating enzymes.

Authors:  Imsang Lee; Hermann Schindelin
Journal:  Cell       Date:  2008-07-25       Impact factor: 41.582

Review 4.  The emerging complexity of protein ubiquitination.

Authors:  David Komander
Journal:  Biochem Soc Trans       Date:  2009-10       Impact factor: 5.407

5.  Crystal structure of UbcH5b~ubiquitin intermediate: insight into the formation of the self-assembled E2~Ub conjugates.

Authors:  Eri Sakata; Tadashi Satoh; Shunsuke Yamamoto; Yoshiki Yamaguchi; Maho Yagi-Utsumi; Eiji Kurimoto; Keiji Tanaka; Soichi Wakatsuki; Koichi Kato
Journal:  Structure       Date:  2010-01-13       Impact factor: 5.006

6.  A novel genetic system to detect protein-protein interactions.

Authors:  S Fields; O Song
Journal:  Nature       Date:  1989-07-20       Impact factor: 49.962

7.  The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis.

Authors:  Jennifer M Gagne; Brian P Downes; Shin-Han Shiu; Adam M Durski; Richard D Vierstra
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-08       Impact factor: 11.205

8.  Jalview Version 2--a multiple sequence alignment editor and analysis workbench.

Authors:  Andrew M Waterhouse; James B Procter; David M A Martin; Michèle Clamp; Geoffrey J Barton
Journal:  Bioinformatics       Date:  2009-01-16       Impact factor: 6.937

9.  The small, versatile pPZP family of Agrobacterium binary vectors for plant transformation.

Authors:  P Hajdukiewicz; Z Svab; P Maliga
Journal:  Plant Mol Biol       Date:  1994-09       Impact factor: 4.076

10.  Effect of Arabidopsis COP10 ubiquitin E2 enhancement activity across E2 families and functional conservation among its canonical homologues.

Authors:  On Sun Lau; Xing Wang Deng
Journal:  Biochem J       Date:  2009-03-15       Impact factor: 3.857

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  13 in total

Review 1.  The expanding universe of ubiquitin and ubiquitin-like modifiers.

Authors:  Richard D Vierstra
Journal:  Plant Physiol       Date:  2012-06-12       Impact factor: 8.340

Review 2.  Ubiquitin on the move: the ubiquitin modification system plays diverse roles in the regulation of endoplasmic reticulum- and plasma membrane-localized proteins.

Authors:  Damian D Guerra; Judy Callis
Journal:  Plant Physiol       Date:  2012-06-22       Impact factor: 8.340

Review 3.  Post-translational modification and protein sorting to small extracellular vesicles including exosomes by ubiquitin and UBLs.

Authors:  Hiroshi Ageta; Kunihiro Tsuchida
Journal:  Cell Mol Life Sci       Date:  2019-07-30       Impact factor: 9.261

4.  Nitrogen limitation adaptation, a target of microRNA827, mediates degradation of plasma membrane-localized phosphate transporters to maintain phosphate homeostasis in Arabidopsis.

Authors:  Wei-Yi Lin; Teng-Kuei Huang; Tzyy-Jen Chiou
Journal:  Plant Cell       Date:  2013-10-11       Impact factor: 11.277

5.  Identification of downstream components of ubiquitin-conjugating enzyme PHOSPHATE2 by quantitative membrane proteomics in Arabidopsis roots.

Authors:  Teng-Kuei Huang; Chia-Li Han; Shu-I Lin; Yu-Ju Chen; Yi-Chuan Tsai; Yet-Ran Chen; June-Wei Chen; Wei-Yi Lin; Pei-Mien Chen; Tzu-Yin Liu; Ying-Shin Chen; Ching-Mei Sun; Tzyy-Jen Chiou
Journal:  Plant Cell       Date:  2013-10-11       Impact factor: 11.277

6.  The ubiquitination machinery of the ubiquitin system.

Authors:  Judy Callis
Journal:  Arabidopsis Book       Date:  2014-10-06

7.  Insights into Ubiquitination from the Unique Clamp-like Binding of the RING E3 AO7 to the E2 UbcH5B.

Authors:  Shengjian Li; Yu-He Liang; Jennifer Mariano; Meredith B Metzger; Daniel K Stringer; Ventzislava A Hristova; Jess Li; Paul A Randazzo; Yien Che Tsai; Xinhua Ji; Allan M Weissman
Journal:  J Biol Chem       Date:  2015-10-16       Impact factor: 5.157

Review 8.  RING-type E3 ligases: master manipulators of E2 ubiquitin-conjugating enzymes and ubiquitination.

Authors:  Meredith B Metzger; Jonathan N Pruneda; Rachel E Klevit; Allan M Weissman
Journal:  Biochim Biophys Acta       Date:  2013-06-06

9.  Flying saucer1 is a transmembrane RING E3 ubiquitin ligase that regulates the degree of pectin methylesterification in Arabidopsis seed mucilage.

Authors:  Catalin Voiniciuc; Gillian H Dean; Jonathan S Griffiths; Kerstin Kirchsteiger; Yeen Ting Hwang; Alan Gillett; Graham Dow; Tamara L Western; Mark Estelle; George W Haughn
Journal:  Plant Cell       Date:  2013-03-12       Impact factor: 11.277

10.  A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity.

Authors:  Bangjun Zhou; Ravi V Mural; Xuanyang Chen; Matt E Oates; Richard A Connor; Gregory B Martin; Julian Gough; Lirong Zeng
Journal:  Plant Physiol       Date:  2016-12-01       Impact factor: 8.340

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