Literature DB >> 20083102

X-changing information on X inactivation.

Tahsin Stefan Barakat1, Iris Jonkers, Kim Monkhorst, Joost Gribnau.   

Abstract

In female somatic cells of mammalian species one X chromosome is inactivated to ensure dosage equality of X-encoded genes between females and males, during development and adulthood. X chromosome inactivation (XCI) involves various epigenetic mechanisms, including RNA mediated gene silencing in cis, DNA methylation, and changes in chromatin modifications and composition. XCI therefore provides an attractive paradigm to study epigenetic gene regulation in a more general context. The XCI process starts with counting of the number of X chromosomes present in a nucleus, and initiation of XCI follows if this number exceeds one per diploid genome. Recently, X-encoded RNF12 has been identified as a dose-dependent activator of XCI. In addition, other factors, including the pluripotency factors OCT4, SOX2 and Nanog, have been implicated to play a role in suppression of initiation of XCI. In this review, we highlight and explain these new and old findings in the context of a stochastic model for X chromosome counting and XCI initiation. 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20083102     DOI: 10.1016/j.yexcr.2010.01.015

Source DB:  PubMed          Journal:  Exp Cell Res        ISSN: 0014-4827            Impact factor:   3.905


  21 in total

Review 1.  Nuclear organization and dosage compensation.

Authors:  Jennifer C Chow; Edith Heard
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-10-13       Impact factor: 10.005

2.  Disruption of a conserved region of Xist exon 1 impairs Xist RNA localisation and X-linked gene silencing during random and imprinted X chromosome inactivation.

Authors:  Claire E Senner; Tatyana B Nesterova; Sara Norton; Hamlata Dewchand; Jonathan Godwin; Winifred Mak; Neil Brockdorff
Journal:  Development       Date:  2011-03-09       Impact factor: 6.868

Review 3.  Environmental pollutants: genetic damage and epigenetic changes in male germ cells.

Authors:  Cecilia Vecoli; Luigi Montano; Maria Grazia Andreassi
Journal:  Environ Sci Pollut Res Int       Date:  2016-09-26       Impact factor: 4.223

4.  X-inactivation and X-reactivation: epigenetic hallmarks of mammalian reproduction and pluripotent stem cells.

Authors:  Bernhard Payer; Jeannie T Lee; Satoshi H Namekawa
Journal:  Hum Genet       Date:  2011-06-12       Impact factor: 4.132

Review 5.  Role of ATRX in chromatin structure and function: implications for chromosome instability and human disease.

Authors:  Rabindranath De La Fuente; Claudia Baumann; Maria M Viveiros
Journal:  Reproduction       Date:  2011-06-08       Impact factor: 3.906

6.  Identification of Intellectual Disability Genes in Female Patients with a Skewed X-Inactivation Pattern.

Authors:  Nathalie Fieremans; Hilde Van Esch; Maureen Holvoet; Gert Van Goethem; Koenraad Devriendt; Monica Rosello; Sonia Mayo; Francisco Martinez; Shalini Jhangiani; Donna M Muzny; Richard A Gibbs; James R Lupski; Joris R Vermeesch; Peter Marynen; Guy Froyen
Journal:  Hum Mutat       Date:  2016-05-25       Impact factor: 4.878

7.  Human inactive X chromosome is compacted through a PRC2-independent SMCHD1-HBiX1 pathway.

Authors:  Ryu-Suke Nozawa; Koji Nagao; Ken-Taro Igami; Sachiko Shibata; Natsuko Shirai; Naohito Nozaki; Takashi Sado; Hiroshi Kimura; Chikashi Obuse
Journal:  Nat Struct Mol Biol       Date:  2013-03-31       Impact factor: 15.369

Review 8.  Advances in understanding chromosome silencing by the long non-coding RNA Xist.

Authors:  Takashi Sado; Neil Brockdorff
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-01-05       Impact factor: 6.237

9.  Structural and numerical changes of chromosome X in patients with esophageal atresia.

Authors:  Erwin Brosens; Elisabeth M de Jong; Tahsin Stefan Barakat; Bert H Eussen; Barbara D'haene; Elfride De Baere; Hannah Verdin; Pino J Poddighe; Robert-Jan Galjaard; Joost Gribnau; Alice S Brooks; Dick Tibboel; Annelies de Klein
Journal:  Eur J Hum Genet       Date:  2014-01-08       Impact factor: 4.246

10.  Sex-specific silencing of X-linked genes by Xist RNA.

Authors:  Srimonta Gayen; Emily Maclary; Michael Hinten; Sundeep Kalantry
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-06       Impact factor: 11.205

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