Literature DB >> 20066078

The measure of success: constraints, objectives, and tradeoffs in morphogen-mediated patterning.

Arthur D Lander1, Wing-Cheong Lo, Qing Nie, Frederic Y M Wan.   

Abstract

A large, diverse, and growing number of strategies have been proposed to explain how morphogen gradients achieve robustness and precision. We argue that, to be useful, the evaluation of such strategies must take into account the constraints imposed by competing objectives and performance tradeoffs. This point is illustrated through a mathematical and computational analysis of the strategy of self-enhanced morphogen clearance. The results suggest that the usefulness of this strategy comes less from its ability to increase robustness to morphogen source fluctuations per se, than from its ability to overcome specific kinds of noise, and to increase the fraction of a morphogen gradient within which robust threshold positions may be established. This work also provides new insights into the longstanding question of why morphogen gradients show a maximum range in vivo.

Mesh:

Year:  2009        PMID: 20066078      PMCID: PMC2742077          DOI: 10.1101/cshperspect.a002022

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  37 in total

1.  Complexity and robustness.

Authors:  J M Carlson; John Doyle
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-19       Impact factor: 11.205

2.  Optimal placement of multiple morphogen sources.

Authors:  Y Morishita; Y Iwasa
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-04-16

3.  Dally regulates Dpp morphogen gradient formation in the Drosophila wing.

Authors:  Momoko Fujise; Satomi Takeo; Keisuke Kamimura; Takashi Matsuo; Toshiro Aigaki; Susumu Izumi; Hiroshi Nakato
Journal:  Development       Date:  2003-04       Impact factor: 6.868

4.  Long-range action of Wingless organizes the dorsal-ventral axis of the Drosophila wing.

Authors:  C J Neumann; S M Cohen
Journal:  Development       Date:  1997-02       Impact factor: 6.868

5.  Robustness of the BMP morphogen gradient in Drosophila embryonic patterning.

Authors:  Avigdor Eldar; Ruslan Dorfman; Daniel Weiss; Hilary Ashe; Ben-Zion Shilo; Naama Barkai
Journal:  Nature       Date:  2002-09-19       Impact factor: 49.962

6.  Direct and long-range action of a DPP morphogen gradient.

Authors:  D Nellen; R Burke; G Struhl; K Basler
Journal:  Cell       Date:  1996-05-03       Impact factor: 41.582

7.  Dally regulates Dpp morphogen gradient formation by stabilizing Dpp on the cell surface.

Authors:  Takuya Akiyama; Keisuke Kamimura; Cyndy Firkus; Satomi Takeo; Osamu Shimmi; Hiroshi Nakato
Journal:  Dev Biol       Date:  2007-11-01       Impact factor: 3.582

Review 8.  The interpretation of morphogen gradients.

Authors:  Hilary L Ashe; James Briscoe
Journal:  Development       Date:  2006-02       Impact factor: 6.868

9.  Biological systems from an engineer's point of view.

Authors:  Gregory T Reeves; Scott E Fraser
Journal:  PLoS Biol       Date:  2009-01-20       Impact factor: 8.029

10.  Fundamental limits to position determination by concentration gradients.

Authors:  Filipe Tostevin; Pieter Rein ten Wolde; Martin Howard
Journal:  PLoS Comput Biol       Date:  2007-03-19       Impact factor: 4.475

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  28 in total

Review 1.  Shaping sound in space: the regulation of inner ear patterning.

Authors:  Andrew K Groves; Donna M Fekete
Journal:  Development       Date:  2012-01       Impact factor: 6.868

2.  Secreted, receptor-associated bone morphogenetic protein regulators reduce stochastic noise intrinsic to many extracellular morphogen distributions.

Authors:  Mohammad Shahriar Karim; Gregery T Buzzard; David M Umulis
Journal:  J R Soc Interface       Date:  2011-10-19       Impact factor: 4.118

Review 3.  How cells know where they are.

Authors:  Arthur D Lander
Journal:  Science       Date:  2013-02-22       Impact factor: 47.728

4.  Robust and precise morphogen-mediated patterning: trade-offs, constraints and mechanisms.

Authors:  Wing-Cheong Lo; Shaohua Zhou; Frederic Y-M Wan; Arthur D Lander; Qing Nie
Journal:  J R Soc Interface       Date:  2015-01-06       Impact factor: 4.118

Review 5.  Generation of extracellular morphogen gradients: the case for diffusion.

Authors:  Kristina S Stapornwongkul; Jean-Paul Vincent
Journal:  Nat Rev Genet       Date:  2021-03-25       Impact factor: 53.242

6.  External noise control in inherently stochastic biological systems.

Authors:  Likun Zheng; Meng Chen; Qing Nie
Journal:  J Math Phys       Date:  2012-11-05       Impact factor: 1.488

Review 7.  The imperatives of context and contour for morphogen dispersion.

Authors:  Thomas B Kornberg
Journal:  Biophys J       Date:  2012-12-05       Impact factor: 4.033

Review 8.  Extracellular movement of signaling molecules.

Authors:  Patrick Müller; Alexander F Schier
Journal:  Dev Cell       Date:  2011-07-19       Impact factor: 12.270

9.  Specified neural progenitors sort to form sharp domains after noisy Shh signaling.

Authors:  Fengzhu Xiong; Andrea R Tentner; Peng Huang; Arnaud Gelas; Kishore R Mosaliganti; Lydie Souhait; Nicolas Rannou; Ian A Swinburne; Nikolaus D Obholzer; Paul D Cowgill; Alexander F Schier; Sean G Megason
Journal:  Cell       Date:  2013-04-25       Impact factor: 41.582

Review 10.  Pattern, growth, and control.

Authors:  Arthur D Lander
Journal:  Cell       Date:  2011-03-18       Impact factor: 41.582

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