Literature DB >> 20065681

Biodosimetry on small blood volume using gene expression assay.

Muriel Brengues1, Brigitte Paap, Michael Bittner, Sally Amundson, Bruce Seligmann, Ronald Korn, Ralf Lenigk, Frederic Zenhausern.   

Abstract

This paper reports the development of a biodosimetry device suitable for rapidly measuring expression levels of a low-density gene set that can define radiation exposure, dose and injury in a public health emergency. The platform comprises a set of 14 genes selected on the basis of their abundance and differential expression level in response to radiation from an expression profiling series measuring 41,000 transcripts. Gene expression is analyzed through direct signal amplification using a quantitative Nuclease Protection Assay (qNPA). This assay can be configured as either a high-throughput microplate assay or as a handheld detection device for individual point-of-care assays. Recently, we were able to successfully develop the qNPA platform to measure gene expression levels directly from human whole blood samples. The assay can be performed with volumes as small as 30 microL of whole blood, which is compatible with collection from a fingerstick. We analyzed in vitro irradiated blood samples with qNPA. The results revealed statistically significant discrimination between irradiated and non-irradiated samples. These results indicate that the qNPA platform combined with a gene profile based on a small number of genes is a valid test to measure biological radiation exposure. The scalability characteristics of the assay make it appropriate for population triage. This biodosimetry platform could also be used for personalized monitoring of radiotherapy treatments received by patients.

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Year:  2010        PMID: 20065681      PMCID: PMC3677703          DOI: 10.1097/01.HP.0000346706.44253.5c

Source DB:  PubMed          Journal:  Health Phys        ISSN: 0017-9078            Impact factor:   1.316


  13 in total

Review 1.  The complexity of radiation stress responses: analysis by informatics and functional genomics approaches.

Authors:  A J Fornace; S A Amundson; M Bittner; T G Myers; P Meltzer; J N Weinsten; J Trent
Journal:  Gene Expr       Date:  1999

2.  Stress-gene induction by low-dose gamma irradiation.

Authors:  Albert J Fornace; Sally A Amundson; Khanh T Do; Paul Meltzer; Jeffrey Trent; Michael Bittner
Journal:  Mil Med       Date:  2002-02       Impact factor: 1.437

3.  Induction of gene expression as a monitor of exposure to ionizing radiation.

Authors:  S A Amundson; M Bittner; P Meltzer; J Trent; A J Fornace
Journal:  Radiat Res       Date:  2001-11       Impact factor: 2.841

4.  Differential responses of stress genes to low dose-rate gamma irradiation.

Authors:  Sally A Amundson; Richard Anthony Lee; Christine A Koch-Paiz; Michael L Bittner; Paul Meltzer; Jeffrey M Trent; Albert J Fornace
Journal:  Mol Cancer Res       Date:  2003-04       Impact factor: 5.852

5.  Self-contained, fully integrated biochip for sample preparation, polymerase chain reaction amplification, and DNA microarray detection.

Authors:  Robin Hui Liu; Jianing Yang; Ralf Lenigk; Justin Bonanno; Piotr Grodzinski
Journal:  Anal Chem       Date:  2004-04-01       Impact factor: 6.986

6.  Early-response biological dosimetry--recommended countermeasure enhancements for mass-casualty radiological incidents and terrorism.

Authors:  William F Blakely; Charles A Salter; Pataje G S Prasanna
Journal:  Health Phys       Date:  2005-11       Impact factor: 1.316

Review 7.  Biological indicators for the identification of ionizing radiation exposure in humans.

Authors:  S A Amundson; M Bittner; P Meltzer; J Trent; A J Fornace
Journal:  Expert Rev Mol Diagn       Date:  2001-07       Impact factor: 5.225

8.  Identification of potential mRNA biomarkers in peripheral blood lymphocytes for human exposure to ionizing radiation.

Authors:  S A Amundson; K T Do; S Shahab; M Bittner; P Meltzer; J Trent; A J Fornace
Journal:  Radiat Res       Date:  2000-09       Impact factor: 2.841

9.  Development of gene expression signatures for practical radiation biodosimetry.

Authors:  Sunirmal Paul; Sally A Amundson
Journal:  Int J Radiat Oncol Biol Phys       Date:  2008-07-15       Impact factor: 7.038

10.  Human in vivo radiation-induced biomarkers: gene expression changes in radiotherapy patients.

Authors:  Sally A Amundson; Marcy B Grace; Christopher B McLeland; Michael W Epperly; Andrew Yeager; Qimin Zhan; Joel S Greenberger; Albert J Fornace
Journal:  Cancer Res       Date:  2004-09-15       Impact factor: 12.701

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  36 in total

1.  Whole mouse blood microRNA as biomarkers for exposure to γ-rays and (56)Fe ion.

Authors:  Thomas Templin; Sally A Amundson; David J Brenner; Lubomir B Smilenov
Journal:  Int J Radiat Biol       Date:  2011-01-28       Impact factor: 2.694

2.  Laboratory intercomparison of gene expression assays.

Authors:  C Badie; S Kabacik; Y Balagurunathan; N Bernard; M Brengues; G Faggioni; R Greither; F Lista; A Peinnequin; T Poyot; F Herodin; A Missel; B Terbrueggen; F Zenhausern; K Rothkamm; V Meineke; H Braselmann; C Beinke; M Abend
Journal:  Radiat Res       Date:  2013-07-25       Impact factor: 2.841

Review 3.  Prevention of future incidents and investigational lines.

Authors:  Miguel J Martín; José Zapatero; Mario López
Journal:  Rep Pract Oncol Radiother       Date:  2011-07-16

4.  Biodosimetric transcriptional and proteomic changes are conserved in irradiated human tissue.

Authors:  Simon P Keam; Twishi Gulati; Cristina Gamell; Franco Caramia; Gisela Mir Arnau; Cheng Huang; Ralf B Schittenhelm; Oded Kleifeld; Paul J Neeson; Scott G Williams; Ygal Haupt
Journal:  Radiat Environ Biophys       Date:  2018-05-30       Impact factor: 1.925

5.  Whole-blood immunoassay for γH2AX as a radiation biodosimetry assay with minimal sample preparation.

Authors:  Matthew L Johnston; Erik F Young; Kenneth L Shepard
Journal:  Radiat Environ Biophys       Date:  2015-05-03       Impact factor: 1.925

6.  Microfluidic module for blood cell separation for gene expression radiobiological assays.

Authors:  Muriel Brengues; Jian Gu; Frederic Zenhausern
Journal:  Radiat Prot Dosimetry       Date:  2015-04-15       Impact factor: 0.972

Review 7.  Deoxyribonucleic acid damage-associated biomarkers of ionising radiation: current status and future relevance for radiology and radiotherapy.

Authors:  G Manning; K Rothkamm
Journal:  Br J Radiol       Date:  2013-05-09       Impact factor: 3.039

Review 8.  Metabolomic applications in radiation biodosimetry: exploring radiation effects through small molecules.

Authors:  Evan L Pannkuk; Albert J Fornace; Evagelia C Laiakis
Journal:  Int J Radiat Biol       Date:  2017-01-12       Impact factor: 2.694

9.  Diagnosis of partial body radiation exposure in mice using peripheral blood gene expression profiles.

Authors:  Sarah K Meadows; Holly K Dressman; Pamela Daher; Heather Himburg; J Lauren Russell; Phuong Doan; Nelson J Chao; Joseph Lucas; Joseph R Nevins; John P Chute
Journal:  PLoS One       Date:  2010-07-12       Impact factor: 3.240

10.  Gene expression as a biomarker for human radiation exposure.

Authors:  Romaica A Omaruddin; Thomas A Roland; H James Wallace; M Ahmad Chaudhry
Journal:  Hum Cell       Date:  2013-02-28       Impact factor: 4.174

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