Literature DB >> 20051988

Piecemeal or big bangs: correlating the vertebrate evolution with proposed models of gene expansion events.

Amir Ali Abbasi.   

Abstract

Mesh:

Year:  2010        PMID: 20051988     DOI: 10.1038/nrg2600-c1

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


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  12 in total

1.  2R or not 2R: testing hypotheses of genome duplication in early vertebrates.

Authors:  Austin L Hughes; Robert Friedman
Journal:  J Struct Funct Genomics       Date:  2003

2.  Genome duplication, extinction and vertebrate evolution.

Authors:  Philip C J Donoghue; Mark A Purnell
Journal:  Trends Ecol Evol       Date:  2005-06       Impact factor: 17.712

Review 3.  The evolutionary significance of ancient genome duplications.

Authors:  Yves Van de Peer; Steven Maere; Axel Meyer
Journal:  Nat Rev Genet       Date:  2009-08-04       Impact factor: 53.242

4.  Extensive genomic duplication during early chordate evolution.

Authors:  Aoife McLysaght; Karsten Hokamp; Kenneth H Wolfe
Journal:  Nat Genet       Date:  2002-05-28       Impact factor: 38.330

Review 5.  Primate segmental duplications: crucibles of evolution, diversity and disease.

Authors:  Jeffrey A Bailey; Evan E Eichler
Journal:  Nat Rev Genet       Date:  2006-06-13       Impact factor: 53.242

6.  The genome of the sea urchin Strongylocentrotus purpuratus.

Authors:  Erica Sodergren; George M Weinstock; Eric H Davidson; R Andrew Cameron; Richard A Gibbs; Robert C Angerer; Lynne M Angerer; Maria Ina Arnone; David R Burgess; Robert D Burke; James A Coffman; Michael Dean; Maurice R Elphick; Charles A Ettensohn; Kathy R Foltz; Amro Hamdoun; Richard O Hynes; William H Klein; William Marzluff; David R McClay; Robert L Morris; Arcady Mushegian; Jonathan P Rast; L Courtney Smith; Michael C Thorndyke; Victor D Vacquier; Gary M Wessel; Greg Wray; Lan Zhang; Christine G Elsik; Olga Ermolaeva; Wratko Hlavina; Gretchen Hofmann; Paul Kitts; Melissa J Landrum; Aaron J Mackey; Donna Maglott; Georgia Panopoulou; Albert J Poustka; Kim Pruitt; Victor Sapojnikov; Xingzhi Song; Alexandre Souvorov; Victor Solovyev; Zheng Wei; Charles A Whittaker; Kim Worley; K James Durbin; Yufeng Shen; Olivier Fedrigo; David Garfield; Ralph Haygood; Alexander Primus; Rahul Satija; Tonya Severson; Manuel L Gonzalez-Garay; Andrew R Jackson; Aleksandar Milosavljevic; Mark Tong; Christopher E Killian; Brian T Livingston; Fred H Wilt; Nikki Adams; Robert Bellé; Seth Carbonneau; Rocky Cheung; Patrick Cormier; Bertrand Cosson; Jenifer Croce; Antonio Fernandez-Guerra; Anne-Marie Genevière; Manisha Goel; Hemant Kelkar; Julia Morales; Odile Mulner-Lorillon; Anthony J Robertson; Jared V Goldstone; Bryan Cole; David Epel; Bert Gold; Mark E Hahn; Meredith Howard-Ashby; Mark Scally; John J Stegeman; Erin L Allgood; Jonah Cool; Kyle M Judkins; Shawn S McCafferty; Ashlan M Musante; Robert A Obar; Amanda P Rawson; Blair J Rossetti; Ian R Gibbons; Matthew P Hoffman; Andrew Leone; Sorin Istrail; Stefan C Materna; Manoj P Samanta; Viktor Stolc; Waraporn Tongprasit; Qiang Tu; Karl-Frederik Bergeron; Bruce P Brandhorst; James Whittle; Kevin Berney; David J Bottjer; Cristina Calestani; Kevin Peterson; Elly Chow; Qiu Autumn Yuan; Eran Elhaik; Dan Graur; Justin T Reese; Ian Bosdet; Shin Heesun; Marco A Marra; Jacqueline Schein; Michele K Anderson; Virginia Brockton; Katherine M Buckley; Avis H Cohen; Sebastian D Fugmann; Taku Hibino; Mariano Loza-Coll; Audrey J Majeske; Cynthia Messier; Sham V Nair; Zeev Pancer; David P Terwilliger; Cavit Agca; Enrique Arboleda; Nansheng Chen; Allison M Churcher; F Hallböök; Glen W Humphrey; Mohammed M Idris; Takae Kiyama; Shuguang Liang; Dan Mellott; Xiuqian Mu; Greg Murray; Robert P Olinski; Florian Raible; Matthew Rowe; John S Taylor; Kristin Tessmar-Raible; D Wang; Karen H Wilson; Shunsuke Yaguchi; Terry Gaasterland; Blanca E Galindo; Herath J Gunaratne; Celina Juliano; Masashi Kinukawa; Gary W Moy; Anna T Neill; Mamoru Nomura; Michael Raisch; Anna Reade; Michelle M Roux; Jia L Song; Yi-Hsien Su; Ian K Townley; Ekaterina Voronina; Julian L Wong; Gabriele Amore; Margherita Branno; Euan R Brown; Vincenzo Cavalieri; Véronique Duboc; Louise Duloquin; Constantin Flytzanis; Christian Gache; François Lapraz; Thierry Lepage; Annamaria Locascio; Pedro Martinez; Giorgio Matassi; Valeria Matranga; Ryan Range; Francesca Rizzo; Eric Röttinger; Wendy Beane; Cynthia Bradham; Christine Byrum; Tom Glenn; Sofia Hussain; Gerard Manning; Esther Miranda; Rebecca Thomason; Katherine Walton; Athula Wikramanayke; Shu-Yu Wu; Ronghui Xu; C Titus Brown; Lili Chen; Rachel F Gray; Pei Yun Lee; Jongmin Nam; Paola Oliveri; Joel Smith; Donna Muzny; Stephanie Bell; Joseph Chacko; Andrew Cree; Stacey Curry; Clay Davis; Huyen Dinh; Shannon Dugan-Rocha; Jerry Fowler; Rachel Gill; Cerrissa Hamilton; Judith Hernandez; Sandra Hines; Jennifer Hume; Laronda Jackson; Angela Jolivet; Christie Kovar; Sandra Lee; Lora Lewis; George Miner; Margaret Morgan; Lynne V Nazareth; Geoffrey Okwuonu; David Parker; Ling-Ling Pu; Rachel Thorn; Rita Wright
Journal:  Science       Date:  2006-11-10       Impact factor: 47.728

7.  Phylogenetic and chromosomal analyses of multiple gene families syntenic with vertebrate Hox clusters.

Authors:  Görel Sundström; Tomas A Larsson; Dan Larhammar
Journal:  BMC Evol Biol       Date:  2008-09-19       Impact factor: 3.260

8.  Are we degenerate tetraploids? More genomes, new facts.

Authors:  Amir Ali Abbasi
Journal:  Biol Direct       Date:  2008-12-10       Impact factor: 4.540

Review 9.  The origins and impact of primate segmental duplications.

Authors:  Tomas Marques-Bonet; Santhosh Girirajan; Evan E Eichler
Journal:  Trends Genet       Date:  2009-09-30       Impact factor: 11.639

10.  An insight into the phylogenetic history of HOX linked gene families in vertebrates.

Authors:  Amir Ali Abbasi; Karl-Heinz Grzeschik
Journal:  BMC Evol Biol       Date:  2007-11-30       Impact factor: 3.260

View more
  8 in total

1.  2R or not 2R is not the question anymore.

Authors:  Yves Van de Peer; Steven Maere; Axel Meyer
Journal:  Nat Rev Genet       Date:  2010-01-06       Impact factor: 53.242

2.  Horsetails Are Ancient Polyploids: Evidence from Equisetum giganteum.

Authors:  Kevin Vanneste; Lieven Sterck; Alexander Andrew Myburg; Yves Van de Peer; Eshchar Mizrachi
Journal:  Plant Cell       Date:  2015-05-22       Impact factor: 11.277

Review 3.  Diversification of four human HOX gene clusters by step-wise evolution rather than ancient whole-genome duplications.

Authors:  Amir Ali Abbasi
Journal:  Dev Genes Evol       Date:  2015-10-19       Impact factor: 0.900

Review 4.  Capping protein regulators fine-tune actin assembly dynamics.

Authors:  Marc Edwards; Adam Zwolak; Dorothy A Schafer; David Sept; Roberto Dominguez; John A Cooper
Journal:  Nat Rev Mol Cell Biol       Date:  2014-09-10       Impact factor: 94.444

5.  Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous-Paleogene boundary.

Authors:  Kevin Vanneste; Guy Baele; Steven Maere; Yves Van de Peer
Journal:  Genome Res       Date:  2014-05-16       Impact factor: 9.043

6.  Multiple Polyploidization Events across Asteraceae with Two Nested Events in the Early History Revealed by Nuclear Phylogenomics.

Authors:  Chien-Hsun Huang; Caifei Zhang; Mian Liu; Yi Hu; Tiangang Gao; Ji Qi; Hong Ma
Journal:  Mol Biol Evol       Date:  2016-09-07       Impact factor: 16.240

Review 7.  Inference of the ancestral vertebrate phenotype through vestiges of the whole-genome duplications.

Authors:  Koh Onimaru; Shigehiro Kuraku
Journal:  Brief Funct Genomics       Date:  2018-09-27       Impact factor: 4.241

8.  Evolutionary history of the human multigene families reveals widespread gene duplications throughout the history of animals.

Authors:  Nashaiman Pervaiz; Nazia Shakeel; Ayesha Qasim; Rabail Zehra; Saneela Anwar; Neenish Rana; Yongbiao Xue; Zhang Zhang; Yiming Bao; Amir Ali Abbasi
Journal:  BMC Evol Biol       Date:  2019-06-20       Impact factor: 3.260

  8 in total

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