Literature DB >> 20034594

Formal representation of eligibility criteria: a literature review.

Chunhua Weng1, Samson W Tu, Ida Sim, Rachel Richesson.   

Abstract

Standards-based, computable knowledge representations for eligibility criteria are increasingly needed to provide computer-based decision support for automated research participant screening, clinical evidence application, and clinical research knowledge management. We surveyed the literature and identified five aspects of eligibility criteria knowledge representation that contribute to the various research and clinical applications: the intended use of computable eligibility criteria, the classification of eligibility criteria, the expression language for representing eligibility rules, the encoding of eligibility concepts, and the modeling of patient data. We consider three of these aspects (expression language, codification of eligibility concepts, and patient data modeling) to be essential constructs of a formal knowledge representation for eligibility criteria. The requirements for each of the three knowledge constructs vary for different use cases, which therefore should inform the development and choice of the constructs toward cost-effective knowledge representation efforts. We discuss the implications of our findings for standardization efforts toward knowledge representation for sharable and computable eligibility criteria.

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Year:  2009        PMID: 20034594      PMCID: PMC2878905          DOI: 10.1016/j.jbi.2009.12.004

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  55 in total

1.  A flexible approach to guideline modeling.

Authors:  S W Tu; M A Musen
Journal:  Proc AMIA Symp       Date:  1999

2.  Flexible guideline-based patient careflow systems.

Authors:  S Quaglini; M Stefanelli; G Lanzola; V Caporusso; S Panzarasa
Journal:  Artif Intell Med       Date:  2001-04       Impact factor: 5.326

3.  Enrolling patients into clinical trials faster using RealTime Recuiting.

Authors:  A J Butte; D A Weinstein; I S Kohane
Journal:  Proc AMIA Symp       Date:  2000

4.  Cross-tool communication: from protocol authoring to eligibility determination.

Authors:  J H Gennari; D Sklar; J Silva
Journal:  Proc AMIA Symp       Date:  2001

5.  Modeling data and knowledge in the EON guideline architecture.

Authors:  S W Tu; M A Musen
Journal:  Stud Health Technol Inform       Date:  2001

6.  EON: a component-based approach to automation of protocol-directed therapy.

Authors:  M A Musen; S W Tu; A K Das; Y Shahar
Journal:  J Am Med Inform Assoc       Date:  1996 Nov-Dec       Impact factor: 4.497

7.  ONCODOC: a successful experiment of computer-supported guideline development and implementation in the treatment of breast cancer.

Authors:  B Séroussi; J Bouaud; E C Antoine
Journal:  Artif Intell Med       Date:  2001-04       Impact factor: 5.326

8.  Decision support for clinical trial eligibility determination in breast cancer.

Authors:  L Ohno-Machado; S J Wang; P Mar; A A Boxwala
Journal:  Proc AMIA Symp       Date:  1999

9.  Guideline-based careflow systems.

Authors:  S Quaglini; M Stefanelli; A Cavallini; G Micieli; C Fassino; C Mossa
Journal:  Artif Intell Med       Date:  2000-08       Impact factor: 5.326

10.  Using scenarios in chronic disease management guidelines for primary care.

Authors:  P D Johnson; S Tu; N Booth; B Sugden; I N Purves
Journal:  Proc AMIA Symp       Date:  2000
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  74 in total

1.  Analyzing the heterogeneity and complexity of Electronic Health Record oriented phenotyping algorithms.

Authors:  Mike Conway; Richard L Berg; David Carrell; Joshua C Denny; Abel N Kho; Iftikhar J Kullo; James G Linneman; Jennifer A Pacheco; Peggy Peissig; Luke Rasmussen; Noah Weston; Christopher G Chute; Jyotishman Pathak
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

2.  A practical method for transforming free-text eligibility criteria into computable criteria.

Authors:  Samson W Tu; Mor Peleg; Simona Carini; Michael Bobak; Jessica Ross; Daniel Rubin; Ida Sim
Journal:  J Biomed Inform       Date:  2010-09-17       Impact factor: 6.317

3.  Automatic data source identification for clinical trial eligibility criteria resolution.

Authors:  Chaitanya Shivade; Courtney Hebert; Kelly Regan; Eric Fosler-Lussier; Albert M Lai
Journal:  AMIA Annu Symp Proc       Date:  2017-02-10

4.  eTACTS: a method for dynamically filtering clinical trial search results.

Authors:  Riccardo Miotto; Silis Jiang; Chunhua Weng
Journal:  J Biomed Inform       Date:  2013-08-03       Impact factor: 6.317

5.  Unsupervised mining of frequent tags for clinical eligibility text indexing.

Authors:  Riccardo Miotto; Chunhua Weng
Journal:  J Biomed Inform       Date:  2013-09-10       Impact factor: 6.317

6.  An adaptable architecture for patient cohort identification from diverse data sources.

Authors:  Richard Bache; Simon Miles; Adel Taweel
Journal:  J Am Med Inform Assoc       Date:  2013-09-24       Impact factor: 4.497

7.  Current methodologies for translational bioinformatics.

Authors:  Yves A Lussier; Atul J Butte; Lawrence Hunter
Journal:  J Biomed Inform       Date:  2010-05-12       Impact factor: 6.317

8.  A distribution-based method for assessing the differences between clinical trial target populations and patient populations in electronic health records.

Authors:  C Weng; Y Li; P Ryan; Y Zhang; F Liu; J Gao; J T Bigger; G Hripcsak
Journal:  Appl Clin Inform       Date:  2014-05-07       Impact factor: 2.342

9.  Computable Phenotype Implementation for a National, Multicenter Pragmatic Clinical Trial: Lessons Learned From ADAPTABLE.

Authors:  Faraz S Ahmad; Iben M Ricket; Bradley G Hammill; Lisa Eskenazi; Holly R Robertson; Lesley H Curtis; Cecilia D Dobi; Saket Girotra; Kevin Haynes; Jorge R Kizer; Sunil Kripalani; Mathew T Roe; Christianne L Roumie; Russ Waitman; W Schuyler Jones; Mark G Weiner
Journal:  Circ Cardiovasc Qual Outcomes       Date:  2020-05-29

10.  Desiderata for Major Eligibility Criteria in Breast Cancer Clinical Trials.

Authors:  Matthew L Paulson; Chunhua Weng
Journal:  AMIA Annu Symp Proc       Date:  2015-11-05
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