Literature DB >> 19945343

Guide to the nomenclature of kinetoplastid RNA editing: a proposal.

Larry Simpson, Ruslan Aphasizhev, Julius Lukes, Jorge Cruz-Reyes.   

Abstract

Entities:  

Mesh：

Year:  2009        PMID： 19945343      PMCID： PMC2818556          DOI： 10.1016/j.protis.2009.10.001

Source DB:  PubMed          Journal:  Protist        ISSN： 1434-4610


× No keyword cloud information.
  40 in total

1.  Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair.

Authors:  C E Huang; J Cruz-Reyes; A G Zhelonkina; S O'Hearn; E Wirtz; B Sollner-Webb
Journal:  EMBO J       Date:  2001-09-03       Impact factor: 11.598

2.  Composition of the editing complex of Trypanosoma brucei.

Authors:  K Stuart; A K Panigrahi; A Schnaufer; M Drozdz; C Clayton; R Salavati
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2002-01-29       Impact factor: 6.237

3.  Four related proteins of the Trypanosoma brucei RNA editing complex.

Authors:  A K Panigrahi; A Schnaufer; N Carmean; R P Igo; S P Gygi; N L Ernst; S S Palazzo; D S Weston; R Aebersold; R Salavati; K D Stuart
Journal:  Mol Cell Biol       Date:  2001-10       Impact factor: 4.272

4.  Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria.

Authors:  Ruslan Aphasizhev; Inna Aphasizheva; Robert E Nelson; Guanghan Gao; Agda M Simpson; Xuedong Kang; Arnold M Falick; Sandro Sbicego; Larry Simpson
Journal:  EMBO J       Date:  2003-02-17       Impact factor: 11.598

5.  Kinetoplastid guide RNA biogenesis is dependent on subunits of the mitochondrial RNA binding complex 1 and mitochondrial RNA polymerase.

Authors:  Hassan Hashimi; Zdenka Cicová; Lucie Novotná; Yan-Zi Wen; Julius Lukes
Journal:  RNA       Date:  2009-02-18       Impact factor: 4.942

6.  Snapshots of the RNA editing machine in trypanosomes captured at different assembly stages in vivo.

Authors:  Monika M Golas; Cordula Böhm; Bjoern Sander; Kerstin Effenberger; Michael Brecht; Holger Stark; H Ulrich Göringer
Journal:  EMBO J       Date:  2009-02-05       Impact factor: 11.598

7.  Trypanosome mitochondrial 3' terminal uridylyl transferase (TUTase): the key enzyme in U-insertion/deletion RNA editing.

Authors:  Ruslan Aphasizhev; Sandro Sbicego; Marian Peris; Sei-Heon Jang; Inna Aphasizheva; Agda M Simpson; Anatoly Rivlin; Larry Simpson
Journal:  Cell       Date:  2002-03-08       Impact factor: 41.582

8.  Structure of the core editing complex (L-complex) involved in uridine insertion/deletion RNA editing in trypanosomatid mitochondria.

Authors:  Feng Li; Peng Ge; Wong H Hui; Ivo Atanasov; Kestrel Rogers; Qiang Guo; Daren Osato; Arnold M Falick; Z Hong Zhou; Larry Simpson
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-09       Impact factor: 11.205

9.  Uridine insertion/deletion RNA editing in trypanosomatid mitochondria: In search of the editosome.

Authors:  Daren Osato; Kestrel Rogers; Qiang Guo; Feng Li; Greg Richmond; Felix Klug; Larry Simpson
Journal:  RNA       Date:  2009-05-15       Impact factor: 4.942

10.  A 100-kD complex of two RNA-binding proteins from mitochondria of Leishmania tarentolae catalyzes RNA annealing and interacts with several RNA editing components.

Authors:  Ruslan Aphasizhev; Inna Aphasizheva; Robert E Nelson; Larry Simpson
Journal:  RNA       Date:  2003-01       Impact factor: 4.942
View more
  23 in total

1.  OB-fold domain of KREPA4 mediates high-affinity interaction with guide RNA and possesses annealing activity.

Authors:  Smriti Kala; Reza Salavati
Journal:  RNA       Date:  2010-08-16       Impact factor: 4.942

2.  Kinetoplast DNA-encoded ribosomal protein S12: a possible functional link between mitochondrial RNA editing and translation in Trypanosoma brucei.

Authors:  Inna Aphasizheva; Dmitri A Maslov; Ruslan Aphasizhev
Journal:  RNA Biol       Date:  2013-10-14       Impact factor: 4.652

3.  Guide RNA biogenesis involves a novel RNase III family endoribonuclease in Trypanosoma brucei.

Authors:  Bhaskara Reddy Madina; Gokulan Kuppan; Ajay A Vashisht; Yu-He Liang; Kurtis M Downey; James A Wohlschlegel; Xinhua Ji; Sing-Hoi Sze; James C Sacchettini; Laurie K Read; Jorge Cruz-Reyes
Journal:  RNA       Date:  2011-08-02       Impact factor: 4.942

Review 4.  Constructive edge of uridylation-induced RNA degradation.

Authors:  Ruslan Aphasizhev; Takuma Suematsu; Liye Zhang; Inna Aphasizheva
Journal:  RNA Biol       Date:  2016-10-07       Impact factor: 4.652

5.  Mechanism of U insertion RNA editing in trypanosome mitochondria: the bimodal TUTase activity of the core complex.

Authors:  Gene-Errol Ringpis; Inna Aphasizheva; Xiaorong Wang; Lan Huang; Richard H Lathrop; G Wesley Hatfield; Ruslan Aphasizhev
Journal:  J Mol Biol       Date:  2010-04-01       Impact factor: 5.469

Review 6.  Mitochondrial RNA editing in trypanosomes: small RNAs in control.

Authors:  Ruslan Aphasizhev; Inna Aphasizheva
Journal:  Biochimie       Date:  2014-01-17       Impact factor: 4.079

Review 7.  Uridine insertion/deletion editing in trypanosomes: a playground for RNA-guided information transfer.

Authors:  Ruslan Aphasizhev; Inna Aphasizheva
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-03-23       Impact factor: 9.957

8.  An arginine-glycine-rich RNA binding protein impacts the abundance of specific mRNAs in the mitochondria of Trypanosoma brucei.

Authors:  Natalie M McAdams; Michelle L Ammerman; Julee Nanduri; Kaylen Lott; John C Fisk; Laurie K Read
Journal:  Eukaryot Cell       Date:  2014-12-05

9.  Explorations of linked editosome domains leading to the discovery of motifs defining conserved pockets in editosome OB-folds.

Authors:  Young-Jun Park; Wim G J Hol
Journal:  J Struct Biol       Date:  2012-08-10       Impact factor: 2.867

Review 10.  U-Insertion/Deletion mRNA-Editing Holoenzyme: Definition in Sight.

Authors:  Inna Aphasizheva; Ruslan Aphasizhev
Journal:  Trends Parasitol       Date:  2015-11-10
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.