Literature DB >> 11564867

Four related proteins of the Trypanosoma brucei RNA editing complex.

A K Panigrahi1, A Schnaufer, N Carmean, R P Igo, S P Gygi, N L Ernst, S S Palazzo, D S Weston, R Aebersold, R Salavati, K D Stuart.   

Abstract

RNA editing in kinetoplastid mitochondria occurs by a series of enzymatic steps that is catalyzed by a macromolecular complex. Four novel proteins and their corresponding genes were identified by mass spectrometric analysis of purified editing complexes from Trypanosoma brucei. These four proteins, TbMP81, TbMP63, TbMP42, and TbMP18, contain conserved sequences to various degrees. All four proteins have sequence similarity in the C terminus; TbMP18 has considerable sequence similarity to the C-terminal region of TbMP42, and TbMP81, TbMP63, and TbMP42 contain zinc finger motif(s). Monoclonal antibodies that are specific for TbMP63 and TbMP42 immunoprecipitate in vitro RNA editing activities. The proteins are present in the immunoprecipitates and sediment at 20S along with the in vitro editing, and RNA editing ligases TbMP52 and TbMP48. Recombinant TbMP63 and TbMP52 coimmunoprecipitate. These results indicate that these four proteins are components of the RNA editing complex and that TbMP63 and TbMP52 can interact.

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Year:  2001        PMID: 11564867      PMCID: PMC99860          DOI: 10.1128/MCB.21.20.6833-6840.2001

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  24 in total

1.  Association of two novel proteins, TbMP52 and TbMP48, with the Trypanosoma brucei RNA editing complex.

Authors:  A K Panigrahi; S P Gygi; N L Ernst; R P Igo; S S Palazzo; A Schnaufer; D S Weston; N Carmean; R Salavati; R Aebersold; K D Stuart
Journal:  Mol Cell Biol       Date:  2001-01       Impact factor: 4.272

2.  An RNA ligase essential for RNA editing and survival of the bloodstream form of Trypanosoma brucei.

Authors:  A Schnaufer; A K Panigrahi; B Panicucci; R P Igo; E Wirtz; R Salavati; K Stuart
Journal:  Science       Date:  2001-02-15       Impact factor: 47.728

3.  Uridylate addition and RNA ligation contribute to the specificity of kinetoplastid insertion RNA editing.

Authors:  R P Igo; S S Palazzo; M L Burgess; A K Panigrahi; K Stuart
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

Review 4.  Mass spectrometry and proteomics.

Authors:  S P Gygi; R Aebersold
Journal:  Curr Opin Chem Biol       Date:  2000-10       Impact factor: 8.822

5.  Addition of uridines to edited RNAs in trypanosome mitochondria occurs independently of transcription.

Authors:  M E Harris; D R Moore; S L Hajduk
Journal:  J Biol Chem       Date:  1990-07-05       Impact factor: 5.157

6.  Complexes from Trypanosoma brucei that exhibit deletion editing and other editing-associated properties.

Authors:  R A Corell; L K Read; G R Riley; J K Nellissery; T E Allen; M L Kable; M D Wachal; S D Seiwert; P J Myler; K D Stuart
Journal:  Mol Cell Biol       Date:  1996-04       Impact factor: 4.272

7.  The two RNA ligases of the Trypanosoma brucei RNA editing complex: cloning the essential band IV gene and identifying the band V gene.

Authors:  L N Rusché; C E Huang; K J Piller; M Hemann; E Wirtz; B Sollner-Webb
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

8.  Identification of candidate mitochondrial RNA editing ligases from Trypanosoma brucei.

Authors:  M T McManus; M Shimamura; J Grams; S L Hajduk
Journal:  RNA       Date:  2001-02       Impact factor: 4.942

Review 9.  Uridine insertion/deletion RNA editing in trypanosome mitochondria--a review.

Authors:  A M Estévez; L Simpson
Journal:  Gene       Date:  1999-11-29       Impact factor: 3.688

10.  The IsTaR 1 serodeme of Trypanosoma brucei: development of a new serodeme.

Authors:  K Stuart; E Gobright; L Jenni; M Milhausen; L Thomashow; N Agabian
Journal:  J Parasitol       Date:  1984-10       Impact factor: 1.276

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  73 in total

1.  TbMP81 is required for RNA editing in Trypanosoma brucei.

Authors:  Maciej Drozdz; Setareh S Palazzo; Reza Salavati; Jeff O'Rear; Christine Clayton; Kenneth Stuart
Journal:  EMBO J       Date:  2002-04-02       Impact factor: 11.598

2.  RNA sequence and base pairing effects on insertion editing in Trypanosoma brucei.

Authors:  Robert P Igo; Sobomabo D Lawson; Kenneth Stuart
Journal:  Mol Cell Biol       Date:  2002-03       Impact factor: 4.272

3.  Assembly and function of the RNA editing complex in Trypanosoma brucei requires band III protein.

Authors:  Catherine E Huang; Sean F O'Hearn; Barbara Sollner-Webb
Journal:  Mol Cell Biol       Date:  2002-05       Impact factor: 4.272

4.  Role of uridylate-specific exoribonuclease activity in Trypanosoma brucei RNA editing.

Authors:  Robert P Igo; David S Weston; Nancy Lewis Ernst; Aswini K Panigrahi; Reza Salavati; Kenneth Stuart
Journal:  Eukaryot Cell       Date:  2002-02

5.  Trypanosoma brucei RNA editing complex: band II is structurally critical and maintains band V ligase, which is nonessential.

Authors:  Sean F O'Hearn; Catherine E Huang; Mike Hemann; Alevtina Zhelonkina; Barbara Sollner-Webb
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

6.  Comparative analysis of editosome proteins in trypanosomatids.

Authors:  Elizabeth A Worthey; Achim Schnaufer; I Saira Mian; Kenneth Stuart; Reza Salavati
Journal:  Nucleic Acids Res       Date:  2003-11-15       Impact factor: 16.971

Review 7.  Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing.

Authors:  Larry Simpson; Ruslan Aphasizhev; Guanghan Gao; Xuedong Kang
Journal:  RNA       Date:  2004-02       Impact factor: 4.942

8.  Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria.

Authors:  Ruslan Aphasizhev; Inna Aphasizheva; Robert E Nelson; Guanghan Gao; Agda M Simpson; Xuedong Kang; Arnold M Falick; Sandro Sbicego; Larry Simpson
Journal:  EMBO J       Date:  2003-02-17       Impact factor: 11.598

9.  Identification of novel components of Trypanosoma brucei editosomes.

Authors:  Aswini K Panigrahi; Achim Schnaufer; Nancy L Ernst; Bingbing Wang; Nicole Carmean; Reza Salavati; Kenneth Stuart
Journal:  RNA       Date:  2003-04       Impact factor: 4.942

10.  Sequence and structural requirements for optimal guide RNA-directed insertional editing within Leishmania tarentolae.

Authors:  Raj D Pai; Lisa M Oppegard; Gregory J Connell
Journal:  RNA       Date:  2003-04       Impact factor: 4.942

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