Literature DB >> 19944704

Kinetic instability of the serpin Z alpha1-antitrypsin promotes aggregation.

Anja S Knaupp1, Vita Levina, Amy L Robertson, Mary C Pearce, Stephen P Bottomley.   

Abstract

The serpinopathies encompass a large number of diseases caused by inappropriate conformational change and self-association (polymerization) of a serpin (serine proteinase inhibitor) molecule. The most common serpinopathy is alpha(1)-antitrypsin (alpha(1)AT) deficiency, which is associated with an increased risk for liver cirrhosis, hepatocellular carcinoma and early-onset emphysema. The Z variant of alpha(1)AT, which accounts for 95% of all cases of alpha(1)AT deficiency, polymerizes during synthesis and after secretion. Here, we show using intrinsic and extrinsic fluorescence probes that Z alpha(1)AT exists in a non-native conformation. We examined the thermodynamic stability by transverse urea gradient gel electrophoresis, thermal denaturation and equilibrium guanidine hydrochloride unfolding and found that, despite structural differences between the two proteins, wild-type alpha(1)AT and Z alpha(1)AT display similar unfolding pathways and thermodynamic stabilities. Far-UV circular dichroism and bis-ANS (4,4'-dianilino-1,1'-binaphthyl-5,5'-disulfonic acid, dipotassium salt) fluorescence suggest that the intermediate ensembles formed during unfolding of wild-type alpha(1)AT and Z alpha(1)AT are characterized by similar structural features. Kinetic analysis of the unfolding transition showed that Z alpha(1)AT unfolds at least 1.5-fold faster than the wild type. The biological implications of these data are discussed. 2009 Elsevier Ltd. All rights reserved.

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Year:  2009        PMID: 19944704     DOI: 10.1016/j.jmb.2009.11.048

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  22 in total

1.  The mechanism of fibril formation of a non-inhibitory serpin ovalbumin revealed by the identification of amyloidogenic core regions.

Authors:  Naoki Tanaka; Yumi Morimoto; Yurika Noguchi; Tomoko Tada; Tomonori Waku; Shigeru Kunugi; Takashi Morii; Yin-Fai Lee; Takashi Konno; Nobuyuki Takahashi
Journal:  J Biol Chem       Date:  2010-12-14       Impact factor: 5.157

2.  The structural diversity in α1-antitrypsin misfolding.

Authors:  Stephen P Bottomley
Journal:  EMBO Rep       Date:  2011-09-30       Impact factor: 8.807

3.  Conformational properties of the disease-causing Z variant of α1-antitrypsin revealed by theory and experiment.

Authors:  Itamar Kass; Anja S Knaupp; Stephen P Bottomley; Ashley M Buckle
Journal:  Biophys J       Date:  2012-06-19       Impact factor: 4.033

Review 4.  Successes and challenges in simulating the folding of large proteins.

Authors:  Anne Gershenson; Shachi Gosavi; Pietro Faccioli; Patrick L Wintrode
Journal:  J Biol Chem       Date:  2019-11-11       Impact factor: 5.157

5.  Deficiency Mutations of Alpha-1 Antitrypsin. Effects on Folding, Function, and Polymerization.

Authors:  Imran Haq; James A Irving; Aarash D Saleh; Louis Dron; Gemma L Regan-Mochrie; Neda Motamedi-Shad; John R Hurst; Bibek Gooptu; David A Lomas
Journal:  Am J Respir Cell Mol Biol       Date:  2016-01       Impact factor: 6.914

6.  Loop-sheet mechanism of serpin polymerization tested by reactive center loop mutations.

Authors:  Masayuki Yamasaki; Timothy J Sendall; Laura E Harris; Giles M W Lewis; James A Huntington
Journal:  J Biol Chem       Date:  2010-07-28       Impact factor: 5.157

7.  The shapes of Z-α1-antitrypsin polymers in solution support the C-terminal domain-swap mechanism of polymerization.

Authors:  Manja A Behrens; Timothy J Sendall; Jan S Pedersen; Morten Kjeldgaard; James A Huntington; Jan K Jensen
Journal:  Biophys J       Date:  2014-10-21       Impact factor: 4.033

8.  Development of a small molecule that corrects misfolding and increases secretion of Z α1 -antitrypsin.

Authors:  David A Lomas; James A Irving; Christopher Arico-Muendel; Svetlana Belyanskaya; Andrew Brewster; Murray Brown; Chun-Wa Chung; Hitesh Dave; Alexis Denis; Nerina Dodic; Anthony Dossang; Peter Eddershaw; Diana Klimaszewska; Imran Haq; Duncan S Holmes; Jonathan P Hutchinson; Alistair M Jagger; Toral Jakhria; Emilie Jigorel; John Liddle; Ken Lind; Stefan J Marciniak; Jeff Messer; Margaret Neu; Allison Olszewski; Adriana Ordonez; Riccardo Ronzoni; James Rowedder; Martin Rüdiger; Steve Skinner; Kathrine J Smith; Rebecca Terry; Lionel Trottet; Iain Uings; Steve Wilson; Zhengrong Zhu; Andrew C Pearce
Journal:  EMBO Mol Med       Date:  2021-01-29       Impact factor: 12.137

9.  Reactive centre loop mutants of α-1-antitrypsin reveal position-specific effects on intermediate formation along the polymerization pathway.

Authors:  Imran Haq; James A Irving; Sarah V Faull; Jennifer A Dickens; Adriana Ordóñez; Didier Belorgey; Bibek Gooptu; David A Lomas
Journal:  Biosci Rep       Date:  2013-06-25       Impact factor: 3.840

10.  The roles of helix I and strand 5A in the folding, function and misfolding of α1-antitrypsin.

Authors:  Anja S Knaupp; Shani Keleher; Li Yang; Weiwen Dai; Stephen P Bottomley; Mary C Pearce
Journal:  PLoS One       Date:  2013-01-29       Impact factor: 3.240

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