Literature DB >> 21156792

The mechanism of fibril formation of a non-inhibitory serpin ovalbumin revealed by the identification of amyloidogenic core regions.

Naoki Tanaka1, Yumi Morimoto, Yurika Noguchi, Tomoko Tada, Tomonori Waku, Shigeru Kunugi, Takashi Morii, Yin-Fai Lee, Takashi Konno, Nobuyuki Takahashi.   

Abstract

Ovalbumin (OVA), a non-inhibitory member of the serpin superfamily, forms fibrillar aggregates upon heat-induced denaturation. Recent studies suggested that OVA fibrils are generated by a mechanism similar to that of amyloid fibril formation, which is distinct from polymerization mechanisms proposed for other serpins. In this study, we provide new insights into the mechanism of OVA fibril formation through identification of amyloidogenic core regions using synthetic peptide fragments, site-directed mutagenesis, and limited proteolysis. OVA possesses a single disulfide bond between Cys(73) and Cys(120) in the N-terminal helical region of the protein. Heat treatment of disulfide-reduced OVA resulted in the formation of long straight fibrils that are distinct from the semiflexible fibrils formed from OVA with an intact disulfide. Computer predictions suggest that helix B (hB) of the N-terminal region, strand 3A, and strands 4-5B are highly β-aggregation-prone regions. These predictions were confirmed by the fact that synthetic peptides corresponding to these regions formed amyloid fibrils. Site-directed mutagenesis of OVA indicated that V41A substitution in hB interfered with the formation of fibrils. Co-incubation of a soluble peptide fragment of hB with the disulfide-intact full-length OVA consistently promoted formation of long straight fibrils. In addition, the N-terminal helical region of the heat-induced fibril of OVA was protected from limited proteolysis. These results indicate that the heat-induced fibril formation of OVA occurs by a mechanism involving transformation of the N-terminal helical region of the protein to β-strands, thereby forming sequential intermolecular linkages.

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Year:  2010        PMID: 21156792      PMCID: PMC3037701          DOI: 10.1074/jbc.M110.176396

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  65 in total

1.  Islet amyloid: phase partitioning and secondary nucleation are central to the mechanism of fibrillogenesis.

Authors:  Shae B Padrick; Andrew D Miranker
Journal:  Biochemistry       Date:  2002-04-09       Impact factor: 3.162

2.  Probing the serpin structural-transition mechanism in ovalbumin mutant R339T by proteolytic-cleavage kinetics of the reactive-centre loop.

Authors:  Yasuhiro Arii; Masaaki Hirose
Journal:  Biochem J       Date:  2002-04-15       Impact factor: 3.857

3.  New insight into serpin polymerization and aggregation.

Authors:  James A Huntington; Timothy J Sendall; Masayuki Yamasaki
Journal:  Prion       Date:  2009-01-16       Impact factor: 3.931

4.  Net charge affects morphology and visual properties of ovalbumin aggregates.

Authors:  Mireille Weijers; Kerensa Broersen; Peter A Barneveld; Martien A Cohen Stuart; Rob J Hamer; Harmen H J De Jongh; Ronald W Visschers
Journal:  Biomacromolecules       Date:  2008-10-10       Impact factor: 6.988

5.  Cleaved serpin refolds into the relaxed state via a stressed conformer.

Authors:  Maki Onda; Kazuyo Nakatani; Sayaka Takehara; Mika Nishiyama; Nobuyuki Takahashi; Masaaki Hirose
Journal:  J Biol Chem       Date:  2008-04-07       Impact factor: 5.157

6.  The 2.1-A crystal structure of native neuroserpin reveals unique structural elements that contribute to conformational instability.

Authors:  Sayaka Takehara; Maki Onda; Juan Zhang; Mika Nishiyama; Xiaoyan Yang; Bunzo Mikami; David A Lomas
Journal:  J Mol Biol       Date:  2009-03-10       Impact factor: 5.469

7.  Amyloid fibril formation and chaperone-like activity of peptides from alphaA-crystallin.

Authors:  Naoki Tanaka; Ryoji Tanaka; Mutsumi Tokuhara; Shigeru Kunugi; Yin-Fai Lee; Daizo Hamada
Journal:  Biochemistry       Date:  2008-01-31       Impact factor: 3.162

8.  Self-assembly and hydrogelation of an amyloid peptide fragment.

Authors:  Marta J Krysmann; Valeria Castelletto; Antonios Kelarakis; Ian W Hamley; Rohan A Hule; Darrin J Pochan
Journal:  Biochemistry       Date:  2008-03-28       Impact factor: 3.162

9.  Kinetic partitioning of protein folding and aggregation.

Authors:  Fabrizio Chiti; Niccolò Taddei; Fabiana Baroni; Cristina Capanni; Massimo Stefani; Giampietro Ramponi; Christopher M Dobson
Journal:  Nat Struct Biol       Date:  2002-02

10.  Crystal structure of a stable dimer reveals the molecular basis of serpin polymerization.

Authors:  Masayuki Yamasaki; Wei Li; Daniel J D Johnson; James A Huntington
Journal:  Nature       Date:  2008-10-15       Impact factor: 49.962

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  5 in total

1.  A kinetic study of ovalbumin fibril formation: the importance of fragmentation and end-joining.

Authors:  Jason M D Kalapothakis; Ryan J Morris; Juraj Szavits-Nossan; Kym Eden; Sam Covill; Sean Tabor; Jay Gillam; Perdita E Barran; Rosalind J Allen; Cait E MacPhee
Journal:  Biophys J       Date:  2015-05-05       Impact factor: 4.033

2.  Amyloid form of ovalbumin evokes native antigen-specific immune response in the host: prospective immuno-prophylactic potential.

Authors:  Saba Tufail; Mohammad Owais; Shadab Kazmi; Renu Balyan; Jasneet Kaur Khalsa; Syed Mohd Faisal; Mohd Asif Sherwani; Manzoor Ahmad Gatoo; Mohd Saad Umar; Swaleha Zubair
Journal:  J Biol Chem       Date:  2014-12-15       Impact factor: 5.157

3.  Conformational transitions provoked by organic solvents in chicken egg ovalbumin: mimicking the local environment.

Authors:  Afshin Iram; Aabgeena Naeem
Journal:  Protein J       Date:  2013-01       Impact factor: 2.371

4.  Oxidation of an exposed methionine instigates the aggregation of glyceraldehyde-3-phosphate dehydrogenase.

Authors:  Andre L Samson; Anja S Knaupp; Itamar Kass; Oded Kleifeld; Emilia M Marijanovic; Victoria A Hughes; Chris J Lupton; Ashley M Buckle; Stephen P Bottomley; Robert L Medcalf
Journal:  J Biol Chem       Date:  2014-08-01       Impact factor: 5.157

5.  DMSO and TMAO-Differences in Interactions in Aqueous Solutions of the K-Peptide.

Authors:  Julia Godlewska; Bartosz Cieśla; Jarosław Wawer; Piotr Bruździak
Journal:  Int J Mol Sci       Date:  2022-02-07       Impact factor: 5.923

  5 in total

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