Literature DB >> 19931535

Unexpected diversity of RNase P, an ancient tRNA processing enzyme: challenges and prospects.

Lien B Lai1, Agustín Vioque, Leif A Kirsebom, Venkat Gopalan.   

Abstract

For an enzyme functioning predominantly in a seemingly housekeeping role of 5' tRNA maturation, RNase P displays a remarkable diversity in subunit make-up across the three domains of life. Despite the protein complexity of this ribonucleoprotein enzyme increasing dramatically from bacteria to eukarya, the catalytic function rests with the RNA subunit during evolution. However, the recent demonstration of a protein-only human mitochondrial RNase P has added further intrigue to the compositional variability of this enzyme. In this review, we discuss some possible reasons underlying the structural diversity of the active sites, and use them as thematic bases for elaborating new directions to understand how functional variations might have contributed to the complex evolution of RNase P.

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Year:  2010        PMID: 19931535      PMCID: PMC2799185          DOI: 10.1016/j.febslet.2009.11.048

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  145 in total

1.  Recognition of the 5' leader of pre-tRNA substrates by the active site of ribonuclease P.

Authors:  Nathan H Zahler; Eric L Christian; Michael E Harris
Journal:  RNA       Date:  2003-06       Impact factor: 4.942

2.  Important 2'-hydroxyl groups in model substrates for M1 RNA, the catalytic RNA subunit of RNase P from Escherichia coli.

Authors:  J P Perreault; S Altman
Journal:  J Mol Biol       Date:  1992-07-20       Impact factor: 5.469

3.  Mutual interactions between subunits of the human RNase MRP ribonucleoprotein complex.

Authors:  Tim J M Welting; Walther J van Venrooij; Ger J M Pruijn
Journal:  Nucleic Acids Res       Date:  2004-04-19       Impact factor: 16.971

4.  Interactions between RNase P protein subunits in archaea.

Authors:  Thomas A Hall; James W Brown
Journal:  Archaea       Date:  2004-10       Impact factor: 3.273

5.  Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA.

Authors:  S Niranjanakumari; T Stams; S M Crary; D W Christianson; C A Fierke
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-22       Impact factor: 11.205

6.  Interactions among the protein and RNA subunits of Saccharomyces cerevisiae nuclear RNase P.

Authors:  Felicia Houser-Scott; Shaohua Xiao; Christopher E Millikin; Janice M Zengel; Lasse Lindahl; David R Engelke
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-05       Impact factor: 11.205

7.  Reconstitution of RNase P activity from inactive RNA and protein.

Authors:  R Kole; S Altman
Journal:  Proc Natl Acad Sci U S A       Date:  1979-08       Impact factor: 11.205

8.  Effects of phosphorothioate modifications on precursor tRNA processing by eukaryotic RNase P enzymes.

Authors:  T Pfeiffer; A Tekos; J M Warnecke; D Drainas; D R Engelke; B Séraphin; R K Hartmann
Journal:  J Mol Biol       Date:  2000-05-12       Impact factor: 5.469

9.  Solution structure of Pyrococcus furiosus RPP21, a component of the archaeal RNase P holoenzyme, and interactions with its RPP29 protein partner.

Authors:  Carlos D Amero; William P Boomershine; Yiren Xu; Mark Foster
Journal:  Biochemistry       Date:  2008-10-16       Impact factor: 3.162

10.  Studies on Methanocaldococcus jannaschii RNase P reveal insights into the roles of RNA and protein cofactors in RNase P catalysis.

Authors:  Dileep K Pulukkunat; Venkat Gopalan
Journal:  Nucleic Acids Res       Date:  2008-06-16       Impact factor: 16.971

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  71 in total

1.  PRORP proteins support RNase P activity in both organelles and the nucleus in Arabidopsis.

Authors:  Bernard Gutmann; Anthony Gobert; Philippe Giegé
Journal:  Genes Dev       Date:  2012-05-01       Impact factor: 11.361

Review 2.  Of proteins and RNA: the RNase P/MRP family.

Authors:  Olga Esakova; Andrey S Krasilnikov
Journal:  RNA       Date:  2010-07-13       Impact factor: 4.942

3.  RNase P branches out from RNP to protein: organelle-triggered diversification?

Authors:  Katherine C Goldfarb; Sumit Borah; Thomas R Cech
Journal:  Genes Dev       Date:  2012-05-15       Impact factor: 11.361

4.  A single Arabidopsis organellar protein has RNase P activity.

Authors:  Anthony Gobert; Bernard Gutmann; Andreas Taschner; Markus Gössringer; Johann Holzmann; Roland K Hartmann; Walter Rossmanith; Philippe Giegé
Journal:  Nat Struct Mol Biol       Date:  2010-05-16       Impact factor: 15.369

5.  Ribonuclease P.

Authors:  Sidney Altman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-10-27       Impact factor: 6.237

6.  Biophysical analysis of Arabidopsis protein-only RNase P alone and in complex with tRNA provides a refined model of tRNA binding.

Authors:  Franziska Pinker; Cédric Schelcher; Pablo Fernandez-Millan; Anthony Gobert; Catherine Birck; Aurélien Thureau; Pierre Roblin; Philippe Giegé; Claude Sauter
Journal:  J Biol Chem       Date:  2017-07-10       Impact factor: 5.157

7.  Protein-only RNase P function in Escherichia coli: viability, processing defects and differences between PRORP isoenzymes.

Authors:  Markus Gößringer; Marcus Lechner; Nadia Brillante; Christoph Weber; Walter Rossmanith; Roland K Hartmann
Journal:  Nucleic Acids Res       Date:  2017-07-07       Impact factor: 16.971

8.  Ribosomal protein L7Ae is a subunit of archaeal RNase P.

Authors:  I-Ming Cho; Lien B Lai; Dwi Susanti; Biswarup Mukhopadhyay; Venkat Gopalan
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-30       Impact factor: 11.205

9.  An RNase P-Based Assay for Accurate Determination of the 5'-Deoxy-5'-azidoguanosine-Modified Fraction of in Vitro-Transcribed RNAs.

Authors:  Seth E Lyon; Tien-Hao Chen; Andrew J Wallace; Katie Adib; Venkat Gopalan
Journal:  Chembiochem       Date:  2018-10-24       Impact factor: 3.164

10.  Plant mitochondria use two pathways for the biogenesis of tRNAHis.

Authors:  Antonio Placido; François Sieber; Anthony Gobert; Raffaele Gallerani; Philippe Giegé; Laurence Maréchal-Drouard
Journal:  Nucleic Acids Res       Date:  2010-07-25       Impact factor: 16.971

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