Literature DB >> 19923735

Engineering an improved crystal contact across a solvent-mediated interface of human fibroblast growth factor 1.

Akshaya K Meher1, Sachiko I Blaber, Jihun Lee, Ejiro Honjo, Ryota Kuroki, Michael Blaber.   

Abstract

Large-volume protein crystals are a prerequisite for neutron diffraction studies and their production represents a bottleneck in obtaining neutron structures. Many protein crystals that permit the collection of high-resolution X-ray diffraction data are inappropriate for neutron diffraction owing to a plate-type morphology that limits the crystal volume. Human fibroblast growth factor 1 crystallizes in a plate morphology that yields atomic resolution X-ray diffraction data but has insufficient volume for neutron diffraction. The thin physical dimension has been identified as corresponding to the b cell edge and the X-ray structure identified a solvent-mediated crystal contact adjacent to position Glu81 that was hypothesized to limit efficient crystal growth in this dimension. In this report, a series of mutations at this crystal contact designed to both reduce side-chain entropy and replace the solvent-mediated interface with direct side-chain contacts are reported. The results suggest that improved crystal growth is achieved upon the introduction of direct crystal contacts, while little improvement is observed with side-chain entropy-reducing mutations alone.

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Year:  2009        PMID: 19923735      PMCID: PMC2777043          DOI: 10.1107/S1744309109036987

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  23 in total

1.  Structural interactions of fibroblast growth factor receptor with its ligands.

Authors:  D J Stauber; A D DiGabriele; W A Hendrickson
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

2.  Structure and stability effects of mutations designed to increase the primary sequence symmetry within the core region of a beta-trefoil.

Authors:  S R Brych; S I Blaber; T M Logan; M Blaber
Journal:  Protein Sci       Date:  2001-12       Impact factor: 6.725

3.  Comparison of hydrogen determination with X-ray and neutron crystallography in a human aldose reductase-inhibitor complex.

Authors:  M P Blakeley; A Mitschler; I Hazemann; F Meilleur; D A A Myles; A Podjarny
Journal:  Eur Biophys J       Date:  2006-04-19       Impact factor: 1.733

4.  Rational protein crystallization by mutational surface engineering.

Authors:  Zygmunt S Derewenda
Journal:  Structure       Date:  2004-04       Impact factor: 5.006

5.  Protein crystallization by rational mutagenesis of surface residues: Lys to Ala mutations promote crystallization of RhoGDI.

Authors:  K L Longenecker; S M Garrard; P J Sheffield; Z S Derewenda
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-04-24

6.  Alternative type I and I' turn conformations in the beta8/beta9 beta-hairpin of human acidic fibroblast growth factor.

Authors:  Jaewon Kim; Sachiko I Blaber; Michael Blaber
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

7.  The impact of Glu-->Ala and Glu-->Asp mutations on the crystallization properties of RhoGDI: the structure of RhoGDI at 1.3 A resolution.

Authors:  Agnieszka Mateja; Yancho Devedjiev; Daniel Krowarsch; Kenton Longenecker; Zbigniew Dauter; Jacek Otlewski; Zygmunt S Derewenda
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-11-23

8.  Disulfide bonds are neither required, present, nor compatible with full activity of human recombinant acidic fibroblast growth factor.

Authors:  D L Linemeyer; J G Menke; L J Kelly; J DiSalvo; D Soderman; M T Schaeffer; S Ortega; G Gimenez-Gallego; K A Thomas
Journal:  Growth Factors       Date:  1990       Impact factor: 2.511

9.  Crystal structure of a ternary FGF-FGFR-heparin complex reveals a dual role for heparin in FGFR binding and dimerization.

Authors:  J Schlessinger; A N Plotnikov; O A Ibrahimi; A V Eliseenkova; B K Yeh; A Yayon; R J Linhardt; M Mohammadi
Journal:  Mol Cell       Date:  2000-09       Impact factor: 17.970

10.  An atomic resolution structure for human fibroblast growth factor 1.

Authors:  Matthew J Bernett; Thayumanasamy Somasundaram; Michael Blaber
Journal:  Proteins       Date:  2004-11-15
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