Literature DB >> 19914058

Transposable elements in gene regulation and in the evolution of vertebrate genomes.

Guillaume Bourque1.   

Abstract

Repetitive DNA and in particular transposable elements have been intimately linked to eukaryotic genomes for millions of years. Once overlooked for being only a collection of selfish debris and a nuisance for sequence assembly, genomic repeats are now being recognized as a key driving force in genome evolution. Indeed, by changing the DNA landscape of genomes, transposable elements have been a rich source of innovation in genes, regulatory elements and genome structures. In this review, I will focus on recent advances that demonstrate that genomic repeats have had a global impact on vertebrate gene regulatory networks. I will also summarize results that show how transposable elements have been a major catalyst of structural rearrangements throughout evolution.

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Year:  2009        PMID: 19914058     DOI: 10.1016/j.gde.2009.10.013

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  66 in total

1.  Characterization of transcriptional activation and inserted-into-gene preference of various transposable elements in the Brassica species.

Authors:  Caihua Gao; Meili Xiao; Lingyan Jiang; Jiana Li; Jiaming Yin; Xiaodong Ren; Wei Qian; Ortegón Oscar; Donghui Fu; Zhanglin Tang
Journal:  Mol Biol Rep       Date:  2012-02-11       Impact factor: 2.316

2.  Processing and translation initiation of non-long terminal repeat retrotransposons by hepatitis delta virus (HDV)-like self-cleaving ribozymes.

Authors:  Dana J Ruminski; Chiu-Ho T Webb; Nathan J Riccitelli; Andrej Lupták
Journal:  J Biol Chem       Date:  2011-10-12       Impact factor: 5.157

3.  Differential maintenance of DNA sequences in telomeric and centromeric heterochromatin.

Authors:  P G DeBaryshe; Mary-Lou Pardue
Journal:  Genetics       Date:  2010-11-01       Impact factor: 4.562

Review 4.  Evolutionary impact of transposable elements on genomic diversity and lineage-specific innovation in vertebrates.

Authors:  Ian A Warren; Magali Naville; Domitille Chalopin; Perrine Levin; Chloé Suzanne Berger; Delphine Galiana; Jean-Nicolas Volff
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

5.  Developmental functions of piRNAs and transposable elements: a Drosophila point-of-view.

Authors:  Martine Simonelig
Journal:  RNA Biol       Date:  2011-07-19       Impact factor: 4.652

6.  On transposons and totipotency.

Authors:  Maria-Elena Torres-Padilla
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-02-10       Impact factor: 6.237

7.  The retrovirus HERVH is a long noncoding RNA required for human embryonic stem cell identity.

Authors:  Xinyi Lu; Friedrich Sachs; LeeAnn Ramsay; Pierre-Étienne Jacques; Jonathan Göke; Guillaume Bourque; Huck-Hui Ng
Journal:  Nat Struct Mol Biol       Date:  2014-03-30       Impact factor: 15.369

8.  Biocontrol strain Aspergillus flavus WRRL 1519 has differences in chromosomal organization and an increased number of transposon-like elements compared to other strains.

Authors:  Kayla K Pennerman; Johanny Gonzalez; Lydia R Chenoweth; Joan W Bennett; Guohua Yin; Sui Sheng T Hua
Journal:  Mol Genet Genomics       Date:  2018-08-11       Impact factor: 3.291

Review 9.  Transposable Element Domestication As an Adaptation to Evolutionary Conflicts.

Authors:  Diwash Jangam; Cédric Feschotte; Esther Betrán
Journal:  Trends Genet       Date:  2017-08-24       Impact factor: 11.639

Review 10.  Molecular cytogenetic and genomic insights into chromosomal evolution.

Authors:  A Ruiz-Herrera; M Farré; T J Robinson
Journal:  Heredity (Edinb)       Date:  2011-11-23       Impact factor: 3.821

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