Literature DB >> 28844698

Transposable Element Domestication As an Adaptation to Evolutionary Conflicts.

Diwash Jangam1, Cédric Feschotte2, Esther Betrán3.   

Abstract

Transposable elements (TEs) are selfish genetic units that typically encode proteins that enable their proliferation in the genome and spread across individual hosts. Here we review a growing number of studies that suggest that TE proteins have often been co-opted or 'domesticated' by their host as adaptations to a variety of evolutionary conflicts. In particular, TE-derived proteins have been recurrently repurposed as part of defense systems that protect prokaryotes and eukaryotes against the proliferation of infectious or invasive agents, including viruses and TEs themselves. We argue that the domestication of TE proteins may often be the only evolutionary path toward the mitigation of the cost incurred by their own selfish activities.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  adaptation; evolutionary conflicts; transposable element protein domestication

Mesh:

Substances:

Year:  2017        PMID: 28844698      PMCID: PMC5659911          DOI: 10.1016/j.tig.2017.07.011

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  96 in total

Review 1.  The centromere paradox: stable inheritance with rapidly evolving DNA.

Authors:  S Henikoff; K Ahmad; H S Malik
Journal:  Science       Date:  2001-08-10       Impact factor: 47.728

Review 2.  The outs and ins of transposition: from mu to kangaroo.

Authors:  M Joan Curcio; Keith M Derbyshire
Journal:  Nat Rev Mol Cell Biol       Date:  2003-11       Impact factor: 94.444

Review 3.  T-loops and the origin of telomeres.

Authors:  Titia de Lange
Journal:  Nat Rev Mol Cell Biol       Date:  2004-04       Impact factor: 94.444

4.  Mimulus finds centromeres in the driver's seat.

Authors:  Harmit S Malik
Journal:  Trends Ecol Evol       Date:  2005-04       Impact factor: 17.712

5.  CRISPR provides acquired resistance against viruses in prokaryotes.

Authors:  Rodolphe Barrangou; Christophe Fremaux; Hélène Deveau; Melissa Richards; Patrick Boyaval; Sylvain Moineau; Dennis A Romero; Philippe Horvath
Journal:  Science       Date:  2007-03-23       Impact factor: 47.728

6.  Introns and the origin of nucleus-cytosol compartmentalization.

Authors:  William Martin; Eugene V Koonin
Journal:  Nature       Date:  2006-03-02       Impact factor: 49.962

7.  Fission yeast homologs of human CENP-B have redundant functions affecting cell growth and chromosome segregation.

Authors:  M Baum; L Clarke
Journal:  Mol Cell Biol       Date:  2000-04       Impact factor: 4.272

Review 8.  V(D)J recombination: RAG proteins, repair factors, and regulation.

Authors:  Martin Gellert
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

9.  Convergent domestication of pogo-like transposases into centromere-binding proteins in fission yeast and mammals.

Authors:  Claudio Casola; Donald Hucks; Cédric Feschotte
Journal:  Mol Biol Evol       Date:  2007-10-16       Impact factor: 16.240

10.  RAG1 core and V(D)J recombination signal sequences were derived from Transib transposons.

Authors:  Vladimir V Kapitonov; Jerzy Jurka
Journal:  PLoS Biol       Date:  2005-05-24       Impact factor: 8.029

View more
  83 in total

Review 1.  Border collies of the genome: domestication of an autonomous retrovirus-like transposon.

Authors:  M Joan Curcio
Journal:  Curr Genet       Date:  2018-06-21       Impact factor: 3.886

2.  Structural basis for the activation and suppression of transposition during evolution of the RAG recombinase.

Authors:  Yuhang Zhang; Elizabeth Corbett; Shenping Wu; David G Schatz
Journal:  EMBO J       Date:  2020-09-18       Impact factor: 11.598

3.  Recent evolution of a TET-controlled and DPPA3/STELLA-driven pathway of passive DNA demethylation in mammals.

Authors:  Christopher B Mulholland; Atsuya Nishiyama; Joel Ryan; Ryohei Nakamura; Merve Yiğit; Ivo M Glück; Carina Trummer; Weihua Qin; Michael D Bartoschek; Franziska R Traube; Edris Parsa; Enes Ugur; Miha Modic; Aishwarya Acharya; Paul Stolz; Christoph Ziegenhain; Michael Wierer; Wolfgang Enard; Thomas Carell; Don C Lamb; Hiroyuki Takeda; Makoto Nakanishi; Sebastian Bultmann; Heinrich Leonhardt
Journal:  Nat Commun       Date:  2020-11-24       Impact factor: 14.919

4.  Impaired plasma membrane localization of ubiquitin ligase complex underlies 3-M syndrome development.

Authors:  Pu Wang; Feng Yan; Zhijun Li; Yanbao Yu; Scott E Parnell; Yue Xiong
Journal:  J Clin Invest       Date:  2019-07-25       Impact factor: 14.808

5.  Evolution of the RNA N 6-Methyladenosine Methylome Mediated by Genomic Duplication.

Authors:  Zhenyan Miao; Ting Zhang; Yuhong Qi; Jie Song; Zhaoxue Han; Chuang Ma
Journal:  Plant Physiol       Date:  2019-08-13       Impact factor: 8.340

Review 6.  Horizontal acquisition of transposable elements and viral sequences: patterns and consequences.

Authors:  Clément Gilbert; Cédric Feschotte
Journal:  Curr Opin Genet Dev       Date:  2018-03-02       Impact factor: 5.578

Review 7.  Heterogeneous transposable elements as silencers, enhancers and targets of meiotic recombination.

Authors:  Charles J Underwood; Kyuha Choi
Journal:  Chromosoma       Date:  2019-07-23       Impact factor: 4.316

8.  TypeTE: a tool to genotype mobile element insertions from whole genome resequencing data.

Authors:  Clément Goubert; Jainy Thomas; Lindsay M Payer; Jeffrey M Kidd; Julie Feusier; W Scott Watkins; Kathleen H Burns; Lynn B Jorde; Cédric Feschotte
Journal:  Nucleic Acids Res       Date:  2020-04-06       Impact factor: 16.971

Review 9.  Unveiling Human Non-Random Genome Editing Mechanisms Activated in Response to Chronic Environmental Changes: I. Where Might These Mechanisms Come from and What Might They Have Led To?

Authors:  Loris Zamai
Journal:  Cells       Date:  2020-10-27       Impact factor: 6.600

Review 10.  Regulation of transposable elements by DNA modifications.

Authors:  Özgen Deniz; Jennifer M Frost; Miguel R Branco
Journal:  Nat Rev Genet       Date:  2019-07       Impact factor: 53.242

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.