Literature DB >> 19880344

Activation of gene expression by small RNA.

Kathrin S Fröhlich1, Jörg Vogel.   

Abstract

Small regulatory RNAs (sRNAs) commonly act to downregulate gene expression. In bacteria, however, sRNAs have also been shown to activate genes by a variety of direct or indirect mechanisms. Several sRNAs (DsrA, GlmZ, RNAIII, RprA, RyhB, and Qrr) act as direct translational activators by an 'anti-antisense mechanism' in the 5' mRNA region to liberate a sequestered ribosome binding site, while pairing of GadY sRNA to the 3'-end alters processing and increases stability of its target mRNA. Indirect activation includes cases of RNA mimicry in which degradation of the activating GlmZ sRNA is suppressed by the highly similar GlmY sRNA, or where a pseudo-target mRNA traps MicM sRNA to derepress porin synthesis.

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Year:  2009        PMID: 19880344     DOI: 10.1016/j.mib.2009.09.009

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  111 in total

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5.  A small RNA activates CFA synthase by isoform-specific mRNA stabilization.

Authors:  Kathrin Sophie Fröhlich; Kai Papenfort; Agnes Fekete; Jörg Vogel
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6.  A small RNA serving both the Hfq and CsrA regulons.

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7.  The small RNA, SdsR, acts as a novel type of toxin in Escherichia coli.

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Journal:  RNA Biol       Date:  2018-10-18       Impact factor: 4.652

8.  Small RNA-mediated activation of sugar phosphatase mRNA regulates glucose homeostasis.

Authors:  Kai Papenfort; Yan Sun; Masatoshi Miyakoshi; Carin K Vanderpool; Jörg Vogel
Journal:  Cell       Date:  2013-04-11       Impact factor: 41.582

Review 9.  RNA-mediated regulation in Gram-positive pathogens: an overview punctuated with examples from the group A Streptococcus.

Authors:  Eric W Miller; Tram N Cao; Kathryn J Pflughoeft; Paul Sumby
Journal:  Mol Microbiol       Date:  2014-08-21       Impact factor: 3.501

10.  Freiburg RNA Tools: a web server integrating INTARNA, EXPARNA and LOCARNA.

Authors:  Cameron Smith; Steffen Heyne; Andreas S Richter; Sebastian Will; Rolf Backofen
Journal:  Nucleic Acids Res       Date:  2010-05-05       Impact factor: 16.971

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