Literature DB >> 20520623

All things must pass: contrasts and commonalities in eukaryotic and bacterial mRNA decay.

Joel G Belasco1.   

Abstract

Despite its universal importance for controlling gene expression, mRNA degradation was initially thought to occur by disparate mechanisms in eukaryotes and bacteria. This conclusion was based on differences in the structures used by these organisms to protect mRNA termini and in the RNases and modifying enzymes originally implicated in mRNA decay. Subsequent discoveries have identified several striking parallels between the cellular factors and molecular events that govern mRNA degradation in these two kingdoms of life. Nevertheless, some key distinctions remain, the most fundamental of which may be related to the different mechanisms by which eukaryotes and bacteria control translation initiation.

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Year:  2010        PMID: 20520623      PMCID: PMC3145457          DOI: 10.1038/nrm2917

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  147 in total

1.  Ribonucleic acid-dependent ribonucleotide incorporation. I. Purification and properties of the enzyme.

Authors:  J T AUGUST; P J ORTIZ; J HURWITZ
Journal:  J Biol Chem       Date:  1962-12       Impact factor: 5.157

2.  Studies on the polymerization of adenylic acid by an enzyme of Escherichia coli.

Authors:  M E GOTTESMAN; Z N CANELLAKIS; E S CANELLAKIS
Journal:  Biochim Biophys Acta       Date:  1962-07-09

3.  A faux 3'-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay.

Authors:  Nadia Amrani; Robin Ganesan; Stephanie Kervestin; David A Mangus; Shubhendu Ghosh; Allan Jacobson
Journal:  Nature       Date:  2004-11-04       Impact factor: 49.962

4.  An important role for RNase R in mRNA decay.

Authors:  Zhuan-Fen Cheng; Murray P Deutscher
Journal:  Mol Cell       Date:  2005-01-21       Impact factor: 17.970

Review 5.  Initiation of protein synthesis in bacteria.

Authors:  Brian Søgaard Laursen; Hans Peter Sørensen; Kim Kusk Mortensen; Hans Uffe Sperling-Petersen
Journal:  Microbiol Mol Biol Rev       Date:  2005-03       Impact factor: 11.056

Review 6.  Messenger RNA turnover in eukaryotes: pathways and enzymes.

Authors:  Sylke Meyer; Claudia Temme; Elmar Wahle
Journal:  Crit Rev Biochem Mol Biol       Date:  2004 Jul-Aug       Impact factor: 8.250

7.  RNA degradation by the exosome is promoted by a nuclear polyadenylation complex.

Authors:  John LaCava; Jonathan Houseley; Cosmin Saveanu; Elisabeth Petfalski; Elizabeth Thompson; Alain Jacquier; David Tollervey
Journal:  Cell       Date:  2005-06-03       Impact factor: 41.582

8.  Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expression.

Authors:  Eric Huntzinger; Sandrine Boisset; Cosmin Saveanu; Yvonne Benito; Thomas Geissmann; Abdelkader Namane; Gérard Lina; Jerome Etienne; Bernard Ehresmann; Chantal Ehresmann; Alain Jacquier; François Vandenesch; Pascale Romby
Journal:  EMBO J       Date:  2005-01-27       Impact factor: 11.598

9.  Ribonucleases J1 and J2: two novel endoribonucleases in B.subtilis with functional homology to E.coli RNase E.

Authors:  Sergine Even; Olivier Pellegrini; Lena Zig; Valerie Labas; Joelle Vinh; Dominique Bréchemmier-Baey; Harald Putzer
Journal:  Nucleic Acids Res       Date:  2005-04-14       Impact factor: 16.971

10.  A new yeast poly(A) polymerase complex involved in RNA quality control.

Authors:  Stepánka Vanácová; Jeannette Wolf; Georges Martin; Diana Blank; Sabine Dettwiler; Arno Friedlein; Hanno Langen; Gérard Keith; Walter Keller
Journal:  PLoS Biol       Date:  2005-04-19       Impact factor: 8.029

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  80 in total

1.  Remember your driver.

Authors:  Darren J Burgess
Journal:  Nat Rev Mol Cell Biol       Date:  2012-01-11       Impact factor: 94.444

2.  Quantitative proteomics reveals new insights into erythrocyte invasion by Plasmodium falciparum.

Authors:  Claudia Kuss; Chee Sian Gan; Karthigayan Gunalan; Zbynek Bozdech; Siu Kwan Sze; Peter Rainer Preiser
Journal:  Mol Cell Proteomics       Date:  2011-10-24       Impact factor: 5.911

Review 3.  RNAs: regulators of bacterial virulence.

Authors:  Jonas Gripenland; Sakura Netterling; Edmund Loh; Teresa Tiensuu; Alejandro Toledo-Arana; Jörgen Johansson
Journal:  Nat Rev Microbiol       Date:  2010-12       Impact factor: 60.633

4.  Trends in Symbiont-Induced Host Cellular Differentiation.

Authors:  Shelbi L Russell; Jennie Ruelas Castillo
Journal:  Results Probl Cell Differ       Date:  2020

5.  Small RNA-induced mRNA degradation achieved through both translation block and activated cleavage.

Authors:  Karine Prévost; Guillaume Desnoyers; Jean-François Jacques; François Lavoie; Eric Massé
Journal:  Genes Dev       Date:  2011-02-02       Impact factor: 11.361

6.  Mechanism and distribution of glmS ribozymes.

Authors:  Phillip J McCown; Wade C Winkler; Ronald R Breaker
Journal:  Methods Mol Biol       Date:  2012

7.  A small RNA activates CFA synthase by isoform-specific mRNA stabilization.

Authors:  Kathrin Sophie Fröhlich; Kai Papenfort; Agnes Fekete; Jörg Vogel
Journal:  EMBO J       Date:  2013-10-18       Impact factor: 11.598

8.  Uridylation by TUT4 and TUT7 marks mRNA for degradation.

Authors:  Jaechul Lim; Minju Ha; Hyeshik Chang; S Chul Kwon; Dhirendra K Simanshu; Dinshaw J Patel; V Narry Kim
Journal:  Cell       Date:  2014-12-04       Impact factor: 41.582

9.  Small RNA-mediated activation of sugar phosphatase mRNA regulates glucose homeostasis.

Authors:  Kai Papenfort; Yan Sun; Masatoshi Miyakoshi; Carin K Vanderpool; Jörg Vogel
Journal:  Cell       Date:  2013-04-11       Impact factor: 41.582

10.  Specificity of RppH-dependent RNA degradation in Bacillus subtilis.

Authors:  Ping-kun Hsieh; Jamie Richards; Quansheng Liu; Joel G Belasco
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-22       Impact factor: 11.205

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