Literature DB >> 19850851

Evolution of biological catalysis: ribozyme to RNP enzyme.

T R Cech1.   

Abstract

The enzymes that perform biological catalysis in contemporary organisms are usually proteins, occasionally ribonucleoprotein (RNP) complexes, and in rare instances pure RNA (ribozymes). Because RNA can serve as both an informational molecule and a biocatalyst, it has been attractive to consider a primordial RNA World in which RNA enzymes catalyzed the replication of RNA genomes and an array of other metabolic steps, before the advent of protein enzymes and DNA genomes. By what pathways, then, did the RNA World evolve to the present state? Here, I describe plausible pathways for the evolution of biological catalysis, with special emphasis on the origin of RNP enzymes. Recent findings support the argument that RNP enzymes are not undergoing extinction, but instead, they are continuing to evolve and to elaborate new functions.

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Year:  2009        PMID: 19850851     DOI: 10.1101/sqb.2009.74.024

Source DB:  PubMed          Journal:  Cold Spring Harb Symp Quant Biol        ISSN: 0091-7451


  10 in total

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2.  Structural biology: Lariat lessons.

Authors:  Robert T Batey
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3.  Exploration of RNA Sequence Space in the Absence of a Replicase.

Authors:  Madhan R Tirumalai; Quyen Tran; Maxim Paci; Dimple Chavan; Anuradha Marathe; George E Fox
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Review 4.  Advances in chiral nanozymes: a review.

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Journal:  Mikrochim Acta       Date:  2019-11-15       Impact factor: 5.833

5.  Ribosomes are optimized for autocatalytic production.

Authors:  Shlomi Reuveni; Måns Ehrenberg; Johan Paulsson
Journal:  Nature       Date:  2017-07-19       Impact factor: 49.962

6.  Simple peptides derived from the ribosomal core potentiate RNA polymerase ribozyme function.

Authors:  Shunsuke Tagami; James Attwater; Philipp Holliger
Journal:  Nat Chem       Date:  2017-03-06       Impact factor: 24.427

Review 7.  Proposed ancestors of phage nucleic acid packaging motors (and cells).

Authors:  Philip Serwer
Journal:  Viruses       Date:  2011-07-20       Impact factor: 5.048

Review 8.  A structural perspective of compensatory evolution.

Authors:  Dmitry N Ivankov; Alexei V Finkelstein; Fyodor A Kondrashov
Journal:  Curr Opin Struct Biol       Date:  2014-06-28       Impact factor: 6.809

9.  RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers.

Authors:  Zhichao Miao; Ryszard W Adamiak; Maciej Antczak; Michał J Boniecki; Janusz Bujnicki; Shi-Jie Chen; Clarence Yu Cheng; Yi Cheng; Fang-Chieh Chou; Rhiju Das; Nikolay V Dokholyan; Feng Ding; Caleb Geniesse; Yangwei Jiang; Astha Joshi; Andrey Krokhotin; Marcin Magnus; Olivier Mailhot; Francois Major; Thomas H Mann; Paweł Piątkowski; Radoslaw Pluta; Mariusz Popenda; Joanna Sarzynska; Lizhen Sun; Marta Szachniuk; Siqi Tian; Jian Wang; Jun Wang; Andrew M Watkins; Jakub Wiedemann; Yi Xiao; Xiaojun Xu; Joseph D Yesselman; Dong Zhang; Yi Zhang; Zhenzhen Zhang; Chenhan Zhao; Peinan Zhao; Yuanzhe Zhou; Tomasz Zok; Adriana Żyła; Aiming Ren; Robert T Batey; Barbara L Golden; Lin Huang; David M Lilley; Yijin Liu; Dinshaw J Patel; Eric Westhof
Journal:  RNA       Date:  2020-05-05       Impact factor: 4.942

10.  Harnessing chemical energy for the activation and joining of prebiotic building blocks.

Authors:  Ziwei Liu; Long-Fei Wu; Jianfeng Xu; Claudia Bonfio; David A Russell; John D Sutherland
Journal:  Nat Chem       Date:  2020-10-22       Impact factor: 24.427

  10 in total

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