Literature DB >> 19813739

Effects of urea and trimethylamine-N-oxide on the properties of water and the secondary structure of hen egg white lysozyme.

Aneta Panuszko1, Piotr Bruździak, Jan Zielkiewicz, Dariusz Wyrzykowski, Janusz Stangret.   

Abstract

The influence of urea and trimethylamine-N-oxide (TMAO) on the structure of water and secondary structure of hen egg white lysozyme (HEWL) has been investigated. The hydration of these osmolytes was studied in aqueous solutions by means of FTIR spectra of HDO isotopically diluted in H(2)O. The difference spectra procedure was applied to remove the contribution of bulk water and thus to separate the spectra of solute-affected HDO. The structural-energetic characteristic of these solute-affected water molecules shows that, on average, water affected by TMAO forms stronger H-bonds and is more ordered than pure water. In the case of urea, the H-bonds are very similar to those in pure water. To facilitate the interpretation of the obtained spectral results, calorimetric measurements, DFT calculations, and molecular dynamics (MD) simulations of aqueous osmolyte clusters were performed. All of these results confirmed that the interactions of TMAO with water molecules are much stronger than those of urea with water. Additional ATR FTIR measurements were performed to characterize the influence of the examined osmolytes on the secondary structure of HEW lysozyme. The type of interactions (direct or indirect) was determined, based on the second derivatives of ATR protein spectra record during an increase in the osmolyte concentration. The changes in the amide I band shape caused by urea or TMAO were found to correlate quite well with changes in the water structure around these osmolytes.

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Year:  2009        PMID: 19813739     DOI: 10.1021/jp904001m

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  8 in total

1.  Dynamical Effects of Trimethylamine N-Oxide on Aqueous Solutions of Urea.

Authors:  Xiaojing Teng; Toshiko Ichiye
Journal:  J Phys Chem B       Date:  2019-01-28       Impact factor: 2.991

2.  Solute's perspective on how trimethylamine oxide, urea, and guanidine hydrochloride affect water's hydrogen bonding ability.

Authors:  Ileana M Pazos; Feng Gai
Journal:  J Phys Chem B       Date:  2012-10-09       Impact factor: 2.991

3.  Microscopic insights into the protein-stabilizing effect of trimethylamine N-oxide (TMAO).

Authors:  Jianqiang Ma; Ileana M Pazos; Feng Gai
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-27       Impact factor: 11.205

4.  Taurine as a water structure breaker and protein stabilizer.

Authors:  P Bruździak; A Panuszko; E Kaczkowska; B Piotrowski; A Daghir; S Demkowicz; J Stangret
Journal:  Amino Acids       Date:  2017-10-17       Impact factor: 3.520

5.  Interactions in Ternary Aqueous Solutions of NMA and Osmolytes-PARAFAC Decomposition of FTIR Spectra Series.

Authors:  Emilia Kaczkowska; Aneta Panuszko; Piotr Bruździak
Journal:  Int J Mol Sci       Date:  2021-10-28       Impact factor: 5.923

6.  Mechanism of Osmolyte Stabilization-Destabilization of Proteins: Experimental Evidence.

Authors:  Marcin Stasiulewicz; Aneta Panuszko; Piotr Bruździak; Janusz Stangret
Journal:  J Phys Chem B       Date:  2022-04-20       Impact factor: 3.466

7.  Weighted persistent homology for osmolyte molecular aggregation and hydrogen-bonding network analysis.

Authors:  D Vijay Anand; Zhenyu Meng; Kelin Xia; Yuguang Mu
Journal:  Sci Rep       Date:  2020-06-16       Impact factor: 4.379

8.  The Product of Matrix Metalloproteinase Cleavage of Doxorubicin Conjugate for Anticancer Drug Delivery: Calorimetric, Spectroscopic, and Molecular Dynamics Studies on Peptide-Doxorubicin Binding to DNA.

Authors:  Kamila Butowska; Krzysztof Żamojć; Mateusz Kogut; Witold Kozak; Dariusz Wyrzykowski; Wiesław Wiczk; Jacek Czub; Jacek Piosik; Janusz Rak
Journal:  Int J Mol Sci       Date:  2020-09-21       Impact factor: 5.923

  8 in total

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