Literature DB >> 19811946

Current insights into phage biodiversity and biogeography.

Rebecca Vega Thurber1.   

Abstract

Phages exert tremendous ecological and evolutionary forces directly on their bacterial hosts. Phage induced cell lysis also indirectly contributes to organic and inorganic nutrient recycling. Phage abundance, diversity, and distribution are therefore important parameters in ecosystem function. The assumption that phage consortia are ubiquitous and homogenous across habitats (everything is everywhere) is currently being re-evaluated. New studies on phage biogeography have found that some phages are globally distributed while others are unique and perhaps endemic to specific environments. Furthermore, advances in technology have allowed scientists to conduct experiments aimed at analyzing phage consortia over temporal scales, and surprisingly have found reoccurring patterns. This review discusses currents in the field of phage ecology with particular focus on efforts to characterize phage diversity and biogeography across various spatial and temporal scales.

Mesh:

Year:  2009        PMID: 19811946     DOI: 10.1016/j.mib.2009.08.008

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  37 in total

1.  Diversity and abundance of single-stranded DNA viruses in human feces.

Authors:  Min-Soo Kim; Eun-Jin Park; Seong Woon Roh; Jin-Woo Bae
Journal:  Appl Environ Microbiol       Date:  2011-09-23       Impact factor: 4.792

2.  Dynamic viral populations in hypersaline systems as revealed by metagenomic assembly.

Authors:  Joanne B Emerson; Brian C Thomas; Karen Andrade; Eric E Allen; Karla B Heidelberg; Jillian F Banfield
Journal:  Appl Environ Microbiol       Date:  2012-07-06       Impact factor: 4.792

Review 3.  Homeostasis and its disruption in the lung microbiome.

Authors:  Robert P Dickson; John R Erb-Downward; Gary B Huffnagle
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2015-10-02       Impact factor: 5.464

Review 4.  Diversity and Ecology of Viruses in Hyperarid Desert Soils.

Authors:  Olivier Zablocki; Evelien M Adriaenssens; Don Cowan
Journal:  Appl Environ Microbiol       Date:  2015-11-20       Impact factor: 4.792

5.  Phages in nature.

Authors:  Martha Rj Clokie; Andrew D Millard; Andrey V Letarov; Shaun Heaphy
Journal:  Bacteriophage       Date:  2011-01

6.  Namib Desert Soil Microbial Community Diversity, Assembly, and Function Along a Natural Xeric Gradient.

Authors:  Vincent Scola; Jean-Baptiste Ramond; Aline Frossard; Olivier Zablocki; Evelien M Adriaenssens; Riegardt M Johnson; Mary Seely; Don A Cowan
Journal:  Microb Ecol       Date:  2017-06-24       Impact factor: 4.552

7.  Salmonella bacteriophage diversity reflects host diversity on dairy farms.

Authors:  Andrea I Moreno Switt; Henk C den Bakker; Kitiya Vongkamjan; Karin Hoelzer; Lorin D Warnick; Kevin J Cummings; Martin Wiedmann
Journal:  Food Microbiol       Date:  2013-07-04       Impact factor: 5.516

Review 8.  Using signature genes as tools to assess environmental viral ecology and diversity.

Authors:  Evelien M Adriaenssens; Don A Cowan
Journal:  Appl Environ Microbiol       Date:  2014-08       Impact factor: 4.792

9.  Evolutionary dynamics of clustered irregularly interspaced short palindromic repeat systems in the ocean metagenome.

Authors:  Valery A Sorokin; Mikhail S Gelfand; Irena I Artamonova
Journal:  Appl Environ Microbiol       Date:  2010-01-29       Impact factor: 4.792

Review 10.  Biogeography and taxonomic overview of terrestrial hot spring thermophilic phages.

Authors:  Olivier Zablocki; Leonardo van Zyl; Marla Trindade
Journal:  Extremophiles       Date:  2018-08-18       Impact factor: 2.395

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