Literature DB >> 19805261

Atypical mechanism of conduction in potassium channels.

Simone Furini1, Carmen Domene.   

Abstract

Potassium channels can conduct passively K+ ions with rates of up to approximately 10(8) ions per second at physiological conditions, and they are selective to these species by a factor of 10(4) over Na+ ions. Ion conduction has been proposed to involve transitions between 2 main states, with 2 or 3 K+ ions occupying the selectivity filter separated by an intervening water molecule. The largest free energy barrier of such a process was reported to be of the order of 2-3 kcal mol(-1). Here, we present an alternative mechanism for conduction of K+ in potassium channels where site vacancies are involved, and we propose that coexistence of several ion permeation mechanisms is energetically possible. Conduction can be described as a more anarchic phenomenon than previously characterized by the concerted translocations of K+-water-K+.

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Year:  2009        PMID: 19805261      PMCID: PMC2752519          DOI: 10.1073/pnas.0903226106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  The cavity and pore helices in the KcsA K+ channel: electrostatic stabilization of monovalent cations.

Authors:  B Roux; R MacKinnon
Journal:  Science       Date:  1999-07-02       Impact factor: 47.728

2.  Ion permeation mechanism of the potassium channel.

Authors:  J Aqvist; V Luzhkov
Journal:  Nature       Date:  2000-04-20       Impact factor: 49.962

3.  Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution.

Authors:  Y Zhou; J H Morais-Cabral; A Kaufman; R MacKinnon
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

4.  Energetics of ion conduction through the K+ channel.

Authors:  S Bernèche; B Roux
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

5.  Energetic optimization of ion conduction rate by the K+ selectivity filter.

Authors:  J H Morais-Cabral; Y Zhou; R MacKinnon
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

6.  The occupancy of ions in the K+ selectivity filter: charge balance and coupling of ion binding to a protein conformational change underlie high conduction rates.

Authors:  Yufeng Zhou; Roderick MacKinnon
Journal:  J Mol Biol       Date:  2003-11-07       Impact factor: 5.469

7.  The potassium permeability of a giant nerve fibre.

Authors:  A L HODGKIN; R D KEYNES
Journal:  J Physiol       Date:  1955-04-28       Impact factor: 5.182

8.  A mutant KcsA K(+) channel with altered conduction properties and selectivity filter ion distribution.

Authors:  Ming Zhou; Roderick MacKinnon
Journal:  J Mol Biol       Date:  2004-05-07       Impact factor: 5.469

9.  Streaming potential measurements in Ca2+-activated K+ channels from skeletal and smooth muscle. Coupling of ion and water fluxes.

Authors:  C Alcayaga; X Cecchi; O Alvarez; R Latorre
Journal:  Biophys J       Date:  1989-02       Impact factor: 4.033

10.  Coupling of water and ion fluxes in a K+-selective channel of sarcoplasmic reticulum.

Authors:  C Miller
Journal:  Biophys J       Date:  1982-06       Impact factor: 4.033

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  40 in total

1.  Gating at the selectivity filter of ion channels that conduct Na+ and K+ ions.

Authors:  Simone Furini; Carmen Domene
Journal:  Biophys J       Date:  2011-10-05       Impact factor: 4.033

2.  On ionic conduction in potassium channels.

Authors:  Carmen Domene; Simone Furini
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-02       Impact factor: 11.205

3.  Principles of conduction and hydrophobic gating in K+ channels.

Authors:  Morten Ø Jensen; David W Borhani; Kresten Lindorff-Larsen; Paul Maragakis; Vishwanath Jogini; Michael P Eastwood; Ron O Dror; David E Shaw
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-15       Impact factor: 11.205

4.  Role of methyl-induced polarization in ion binding.

Authors:  Mariana Rossi; Alexandre Tkatchenko; Susan B Rempe; Sameer Varma
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-22       Impact factor: 11.205

Review 5.  K(+) and Na(+) conduction in selective and nonselective ion channels via molecular dynamics simulations.

Authors:  Simone Furini; Carmen Domene
Journal:  Biophys J       Date:  2013-10-15       Impact factor: 4.033

6.  A permeation theory for single-file ion channels: one- and two-step models.

Authors:  Peter Hugo Nelson
Journal:  J Chem Phys       Date:  2011-04-28       Impact factor: 3.488

7.  Challenges and advances in atomistic simulations of potassium and sodium ion channel gating and permeation.

Authors:  Kevin R DeMarco; Slava Bekker; Igor Vorobyov
Journal:  J Physiol       Date:  2018-12-19       Impact factor: 5.182

8.  Nonselective conduction in a mutated NaK channel with three cation-binding sites.

Authors:  Simone Furini; Carmen Domene
Journal:  Biophys J       Date:  2012-11-20       Impact factor: 4.033

Review 9.  Modeling and simulation of ion channels.

Authors:  Christopher Maffeo; Swati Bhattacharya; Jejoong Yoo; David Wells; Aleksei Aksimentiev
Journal:  Chem Rev       Date:  2012-10-04       Impact factor: 60.622

10.  Validity of the Electrodiffusion Model for Calculating Conductance of Simple Ion Channels.

Authors:  Andrew Pohorille; Michael A Wilson; Chenyu Wei
Journal:  J Phys Chem B       Date:  2016-12-12       Impact factor: 2.991

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