Literature DB >> 11689935

Energetic optimization of ion conduction rate by the K+ selectivity filter.

J H Morais-Cabral1, Y Zhou, R MacKinnon.   

Abstract

The K+ selectivity filter catalyses the dehydration, transfer and rehydration of a K+ ion in about ten nanoseconds. This physical process is central to the production of electrical signals in biology. Here we show how nearly diffusion-limited rates are achieved, by analysing ion conduction and the corresponding crystallographic ion distribution in the selectivity filter of the KcsA K+ channel. Measurements with K+ and its slightly larger analogue, Rb+, lead us to conclude that the selectivity filter usually contains two K+ ions separated by one water molecule. The two ions move in a concerted fashion between two configurations, K+-water-K+-water (1,3 configuration) and water-K+-water-K+ (2,4 configuration), until a third ion enters, displacing the ion on the opposite side of the queue. For K+, the energy difference between the 1,3 and 2,4 configurations is close to zero, the condition of maximum conduction rate. The energetic balance between these configurations is a clear example of evolutionary optimization of protein function.

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Year:  2001        PMID: 11689935     DOI: 10.1038/35102000

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  251 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-12       Impact factor: 11.205

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5.  Subtle shades of permeability.

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Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

8.  Modeling diverse range of potassium channels with Brownian dynamics.

Authors:  Shin-Ho Chung; Toby W Allen; Serdar Kuyucak
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

Review 9.  Meeting of the minds: metalloneurochemistry.

Authors:  Shawn C Burdette; Stephen J Lippard
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-24       Impact factor: 11.205

10.  Mechanism of rectification in inward-rectifier K+ channels.

Authors:  Donglin Guo; Yajamana Ramu; Angela M Klem; Zhe Lu
Journal:  J Gen Physiol       Date:  2003-03-17       Impact factor: 4.086

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