Literature DB >> 19793051

Recent advances of genetic ancestry testing in biomedical research and direct to consumer testing.

M Via1, E Ziv, E G Burchard.   

Abstract

In the post-Human Genome Project era, the debate on the concept of race/ethnicity and its implications for biomedical research are dependent on two critical issues: whether and how to classify individuals and whether biological factors play a role in health disparities. The advent of reliable estimates of genetic (or biogeographic) ancestry has provided this debate with a quantitative and more objective tool. The estimation of genetic ancestry allows investigators to control for population stratification in association studies and helps to detect biological causation behind population-specific differences in disease and drug response. New techniques such as admixture mapping can specifically detect population-specific risk alleles for a disease in admixed populations. However, researchers have to be mindful of the correlation between genetic ancestry and socioeconomic and environmental factors that could underlie these differences. More importantly, researchers must avoid the stigmatization of individuals based on perceived or real genetic risks. The latter point will become increasingly sensitive as several 'for profit companies' are offering ancestry and genetic testing directly to consumers and the consequences of the spread of the services of these companies are still unforeseeable.

Entities:  

Mesh:

Year:  2009        PMID: 19793051      PMCID: PMC2857388          DOI: 10.1111/j.1399-0004.2009.01263.x

Source DB:  PubMed          Journal:  Clin Genet        ISSN: 0009-9163            Impact factor:   4.438


  77 in total

1.  Information on ancestry from genetic markers.

Authors:  Carrie Lynn Pfaff; Jill Barnholtz-Sloan; Jennifer K Wagner; Jeffrey C Long
Journal:  Genet Epidemiol       Date:  2004-05       Impact factor: 2.135

2.  Self-reported health, perceived racial discrimination, and skin color in African Americans in the CARDIA study.

Authors:  Luisa N Borrell; Catarina I Kiefe; David R Williams; Ana V Diez-Roux; Penny Gordon-Larsen
Journal:  Soc Sci Med       Date:  2006-06-05       Impact factor: 4.634

3.  Latino populations: a unique opportunity for the study of race, genetics, and social environment in epidemiological research.

Authors:  Esteban González Burchard; Luisa N Borrell; Shweta Choudhry; Mariam Naqvi; Hui-Ju Tsai; Jose R Rodriguez-Santana; Rocio Chapela; Scott D Rogers; Rui Mei; William Rodriguez-Cintron; Jose F Arena; Rick Kittles; Eliseo J Perez-Stable; Elad Ziv; Neil Risch
Journal:  Am J Public Health       Date:  2005-10-27       Impact factor: 9.308

4.  Principal components analysis corrects for stratification in genome-wide association studies.

Authors:  Alkes L Price; Nick J Patterson; Robert M Plenge; Michael E Weinblatt; Nancy A Shadick; David Reich
Journal:  Nat Genet       Date:  2006-07-23       Impact factor: 38.330

5.  Admixture mapping identifies 8q24 as a prostate cancer risk locus in African-American men.

Authors:  Matthew L Freedman; Christopher A Haiman; Nick Patterson; Gavin J McDonald; Arti Tandon; Alicja Waliszewska; Kathryn Penney; Robert G Steen; Kristin Ardlie; Esther M John; Ingrid Oakley-Girvan; Alice S Whittemore; Kathleen A Cooney; Sue A Ingles; David Altshuler; Brian E Henderson; David Reich
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-31       Impact factor: 11.205

6.  Letting the genome out of the bottle--will we get our wish?

Authors:  David J Hunter; Muin J Khoury; Jeffrey M Drazen
Journal:  N Engl J Med       Date:  2008-01-10       Impact factor: 91.245

7.  'Unique' alleles in admixed populations: a strategy for determining 'hereditary' population differences of disease frequencies.

Authors:  R Chakraborty; M I Kamboh; R E Ferrell
Journal:  Ethn Dis       Date:  1991       Impact factor: 1.847

Review 8.  Fixed-dose isosorbide dinitrate-hydralazine: race-based cardiovascular medicine benefit or mirage?

Authors:  Keith C Ferdinand
Journal:  J Law Med Ethics       Date:  2008       Impact factor: 1.718

Review 9.  The use of racial, ethnic, and ancestral categories in human genetics research.

Authors: 
Journal:  Am J Hum Genet       Date:  2005-08-29       Impact factor: 11.025

10.  Beta 2-adrenergic receptor polymorphisms: pharmacogenetic response to bronchodilator among African American asthmatics.

Authors:  Hui-Ju Tsai; Nishat Shaikh; Jennifer Y Kho; Natalie Battle; Mariam Naqvi; Daniel Navarro; Henry Matallana; Craig M Lilly; Celeste S Eng; Gunjan Kumar; Shannon Thyne; H George Watson; Kelley Meade; Michael LeNoir; Shweta Choudhry; Esteban G Burchard
Journal:  Hum Genet       Date:  2006-04-05       Impact factor: 4.132

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  17 in total

1.  Genetic polymorphisms of the organic cation transporter 1 gene (SLC22A1) within the Cape Admixed population of South Africa.

Authors:  Morne Du Plessis; Brendon Pearce; Clifford Jacobs; Nisreen Hoosain; Mongi Benjeddou
Journal:  Mol Biol Rep       Date:  2014-11-15       Impact factor: 2.316

2.  Inferring genetic ancestry: opportunities, challenges, and implications.

Authors:  Charmaine D Royal; John Novembre; Stephanie M Fullerton; David B Goldstein; Jeffrey C Long; Michael J Bamshad; Andrew G Clark
Journal:  Am J Hum Genet       Date:  2010-05-14       Impact factor: 11.025

Review 3.  Direct-to-consumer personalized genomic testing.

Authors:  Cinnamon S Bloss; Burcu F Darst; Eric J Topol; Nicholas J Schork
Journal:  Hum Mol Genet       Date:  2011-08-09       Impact factor: 6.150

4.  Estimates of continental ancestry vary widely among individuals with the same mtDNA haplogroup.

Authors:  Leslie S Emery; Kevin M Magnaye; Abigail W Bigham; Joshua M Akey; Michael J Bamshad
Journal:  Am J Hum Genet       Date:  2015-01-22       Impact factor: 11.025

5.  Inclusion of diverse populations in genomic research and health services: Genomix workshop report.

Authors:  Savio S Mathew; Julian Barwell; Nasaim Khan; Ella Lynch; Michael Parker; Nadeem Qureshi
Journal:  J Community Genet       Date:  2017-07-28

6.  Genetic ancestry inference using support vector machines, and the active emergence of a unique American population.

Authors:  Ryan J Haasl; Catherine A McCarty; Bret A Payseur
Journal:  Eur J Hum Genet       Date:  2012-12-05       Impact factor: 4.246

7.  Impacts of personal DNA ancestry testing.

Authors:  Caryn Kseniya Rubanovich; Riley Taitingfong; Cynthia Triplett; Ondrej Libiger; Nicholas J Schork; Jennifer K Wagner; Cinnamon S Bloss
Journal:  J Community Genet       Date:  2020-08-13

8.  Paternity testing under the cloak of recreational genetics.

Authors:  Nathalie Moray; Katherina E Pink; Pascal Borry; Maarten Hd Larmuseau
Journal:  Eur J Hum Genet       Date:  2017-03-08       Impact factor: 4.246

Review 9.  EGFR molecular testing in African-American non-small cell lung cancer patients - a review of discrepant data.

Authors:  Bradley T Clifford; Pingfu Fu; Nathan A Pennell; Balazs Halmos; Rom S Leidner
Journal:  Transl Lung Cancer Res       Date:  2013-06

10.  Barriers and Strategies Related to Qualitative Research on Genetic Ancestry Testing in Indigenous Communities.

Authors:  Jessica W Blanchard; Gloria Tallbull; Chantelle Wolpert; Jill Powell; Morris W Foster; Charmaine Royal
Journal:  J Empir Res Hum Res Ethics       Date:  2017-04-23       Impact factor: 1.742

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