Literature DB >> 19767433

Complete genome sequence of the ethanol producer Zymomonas mobilis NCIMB 11163.

Vassili N Kouvelis1, Elizabeth Saunders, Thomas S Brettin, David Bruce, Chris Detter, Cliff Han, Milton A Typas, Katherine M Pappas.   

Abstract

Zymomonas mobilis is an ethanol-producing alphaproteobacterium currently considered a major candidate organism for bioethanol production. Here we report the finished and annotated genome sequence of Z. mobilis subsp. mobilis strain NCIMB 11163, a British ale-infecting isolate. This is the first Z. mobilis strain whose genome, chromosomal and plasmid, is presented in its entirety.

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Year:  2009        PMID： 19767433      PMCID： PMC2772497          DOI： 10.1128/JB.01084-09

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  21 in total

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Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

3.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

4.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

5.  Transposon mutagenesis and strain construction in Zymomonas mobilis.

Authors:  K M Pappas; I Galani; M A Typas
Journal:  J Appl Microbiol       Date:  1997-03       Impact factor: 3.772

6.  Content and composition of hopanoids in Zymomonas mobilis under various growth conditions.

Authors:  M A Hermans; B Neuss; H Sahm
Journal:  J Bacteriol       Date:  1991-09       Impact factor: 3.490

Review 7.  Zymomonas mobilis for fuel ethanol and higher value products.

Authors:  P L Rogers; Y J Jeon; K J Lee; H G Lawford
Journal:  Adv Biochem Eng Biotechnol       Date:  2007       Impact factor: 2.635

8.  The genome sequence of the ethanologenic bacterium Zymomonas mobilis ZM4.

Authors:  Jeong-Sun Seo; Hyonyong Chong; Hyun Seok Park; Kyoung-Oh Yoon; Cholhee Jung; Jae Joon Kim; Jin Han Hong; Hyungtae Kim; Jeong-Hyun Kim; Joon-Il Kil; Cheol Ju Park; Hyun-Myung Oh; Jung-Soon Lee; Su-Jung Jin; Hye-Won Um; Hee-Jong Lee; Soo-Jin Oh; Jae Young Kim; Hyung Lyun Kang; Se Yong Lee; Kye Joon Lee; Hyen Sam Kang
Journal:  Nat Biotechnol       Date:  2004-12-12       Impact factor: 54.908

9.  KEGG for linking genomes to life and the environment.

Authors:  Minoru Kanehisa; Michihiro Araki; Susumu Goto; Masahiro Hattori; Mika Hirakawa; Masumi Itoh; Toshiaki Katayama; Shuichi Kawashima; Shujiro Okuda; Toshiaki Tokimatsu; Yoshihiro Yamanishi
Journal:  Nucleic Acids Res       Date:  2007-12-12       Impact factor: 16.971

10.  The Pfam protein families database.

Authors:  Robert D Finn; John Tate; Jaina Mistry; Penny C Coggill; Stephen John Sammut; Hans-Rudolf Hotz; Goran Ceric; Kristoffer Forslund; Sean R Eddy; Erik L L Sonnhammer; Alex Bateman
Journal:  Nucleic Acids Res       Date:  2007-11-26       Impact factor: 16.971
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  19 in total

1.  Denitrifying bacteria isolated from terrestrial subsurface sediments exposed to mixed-waste contamination.

Authors:  Stefan J Green; Om Prakash; Thomas M Gihring; Denise M Akob; Puja Jasrotia; Philip M Jardine; David B Watson; Steven D Brown; Anthony V Palumbo; Joel E Kostka
Journal:  Appl Environ Microbiol       Date:  2010-03-19       Impact factor: 4.792

2.  Purification, crystallization and X-ray crystallographic analysis of a putative exopolyphosphatase from Zymomonas mobilis.

Authors:  Aili Zhang; Erhong Guo; Lanfang Qian; Nga-Yeung Tang; Rory M Watt; Mark Bartlam
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-02-19       Impact factor: 1.056

3.  Genome sequence of the ethanol-producing Zymomonas mobilis subsp. pomaceae lectotype strain ATCC 29192.

Authors:  Vassili N Kouvelis; Karen W Davenport; Thomas S Brettin; David Bruce; Chris Detter; Cliff S Han; Matt Nolan; Roxanne Tapia; Agni Damoulaki; Nikos C Kyrpides; Milton A Typas; Katherine M Pappas
Journal:  J Bacteriol       Date:  2011-07-08       Impact factor: 3.490

4.  Transcriptome profiling of Zymomonas mobilis under ethanol stress.

Authors:  Ming-Xiong He; Bo Wu; Zong-Xia Shui; Qi-Chun Hu; Wen-Guo Wang; Fu-Rong Tan; Xiao-Yu Tang; Qi-Li Zhu; Ke Pan; Qing Li; Xiao-Hong Su
Journal:  Biotechnol Biofuels       Date:  2012-10-11       Impact factor: 6.040

5.  Effect of ADH II deficiency on the intracellular redox homeostasis in Zymomonas mobilis.

Authors:  Nina Galinina; Zane Lasa; Inese Strazdina; Reinis Rutkis; Uldis Kalnenieks
Journal:  ScientificWorldJournal       Date:  2012-05-03

6.  Elucidation of Zymomonas mobilis physiology and stress responses by quantitative proteomics and transcriptomics.

Authors:  Shihui Yang; Chongle Pan; Gregory B Hurst; Lezlee Dice; Brian H Davison; Steven D Brown
Journal:  Front Microbiol       Date:  2014-05-22       Impact factor: 5.640

Review 7.  Zymomonas mobilis: a novel platform for future biorefineries.

Authors:  Ming Xiong He; Bo Wu; Han Qin; Zhi Yong Ruan; Fu Rong Tan; Jing Li Wang; Zong Xia Shui; Li Chun Dai; Qi Li Zhu; Ke Pan; Xiao Yu Tang; Wen Guo Wang; Qi Chun Hu
Journal:  Biotechnol Biofuels       Date:  2014-07-02       Impact factor: 6.040

8.  Systems biology analysis of Zymomonas mobilis ZM4 ethanol stress responses.

Authors:  Shihui Yang; Chongle Pan; Timothy J Tschaplinski; Gregory B Hurst; Nancy L Engle; Wen Zhou; Phuongan Dam; Ying Xu; Miguel Rodriguez; Lezlee Dice; Courtney M Johnson; Brian H Davison; Steven D Brown
Journal:  PLoS One       Date:  2013-07-16       Impact factor: 3.240

9.  Modeling of Zymomonas mobilis central metabolism for novel metabolic engineering strategies.

Authors:  Uldis Kalnenieks; Agris Pentjuss; Reinis Rutkis; Egils Stalidzans; David A Fell
Journal:  Front Microbiol       Date:  2014-02-05       Impact factor: 5.640

10.  pZMO7-Derived shuttle vectors for heterologous protein expression and proteomic applications in the ethanol-producing bacterium Zymomonas mobilis.

Authors:  Lok Yan So; Wen-yang Chen; Donnabella C Lacap-Bugler; Myriam Seemann; Rory M Watt
Journal:  BMC Microbiol       Date:  2014-03-15       Impact factor: 3.605
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