Literature DB >> 19758983

Molecular basis of transcriptional mutagenesis at 8-oxoguanine.

Gerke E Damsma1, Patrick Cramer.   

Abstract

Structure-function analysis has revealed the mechanism of yeast RNA polymerase II transcription at 8-oxoguanine (8-oxoG), the major DNA lesion resulting from oxidative stress. When polymerase II encounters 8-oxoG in the DNA template strand, it can misincorporate adenine, which forms a Hoogsteen bp with 8-oxoG at the active center. This requires rotation of the 8-oxoG base from the standard anti- to an uncommon syn-conformation, which likely occurs during 8-oxoG loading into the active site. The misincorporated adenine escapes intrinsic proofreading, resulting in transcriptional mutagenesis that is observed directly by mass spectrometric RNA analysis.

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Year:  2009        PMID: 19758983      PMCID: PMC2797236          DOI: 10.1074/jbc.M109.022764

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  34 in total

1.  Effects of endogenous DNA base lesions on transcription elongation by mammalian RNA polymerase II. Implications for transcription-coupled DNA repair and transcriptional mutagenesis.

Authors:  Isao Kuraoka; Masaki Endou; Yuki Yamaguchi; Tadashi Wada; Hiroshi Handa; Kiyoji Tanaka
Journal:  J Biol Chem       Date:  2002-12-03       Impact factor: 5.157

2.  Transcription elongation factor S-II maintains transcriptional fidelity and confers oxidative stress resistance.

Authors:  Hiroshi Koyama; Takahiro Ito; Toshiyuki Nakanishi; Nobuyuki Kawamura; Kazuhisa Sekimizu
Journal:  Genes Cells       Date:  2003-10       Impact factor: 1.891

3.  Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase.

Authors:  Luis G Brieba; Brandt F Eichman; Robert J Kokoska; Sylvie Doublié; Tom A Kunkel; Tom Ellenberger
Journal:  EMBO J       Date:  2004-08-05       Impact factor: 11.598

4.  Lesion (in)tolerance reveals insights into DNA replication fidelity.

Authors:  Eva Freisinger; Arthur P Grollman; Holly Miller; Caroline Kisker
Journal:  EMBO J       Date:  2004-04-01       Impact factor: 11.598

Review 5.  Instability and decay of the primary structure of DNA.

Authors:  T Lindahl
Journal:  Nature       Date:  1993-04-22       Impact factor: 49.962

6.  Effect of 8-oxoguanine on transcription elongation by T7 RNA polymerase and mammalian RNA polymerase II.

Authors:  Silvia Tornaletti; Lauren S Maeda; Richard D Kolodner; Philip C Hanawalt
Journal:  DNA Repair (Amst)       Date:  2004-05-04

7.  Error-prone replication of oxidatively damaged DNA by a high-fidelity DNA polymerase.

Authors:  Gerald W Hsu; Matthias Ober; Thomas Carell; Lorena S Beese
Journal:  Nature       Date:  2004-08-22       Impact factor: 49.962

8.  Single-stranded breaks in DNA but not oxidative DNA base damages block transcriptional elongation by RNA polymerase II in HeLa cell nuclear extracts.

Authors:  Scott D Kathe; Guang-Ping Shen; Susan S Wallace
Journal:  J Biol Chem       Date:  2004-02-21       Impact factor: 5.157

9.  Effects of DNA lesions on transcription elongation by T7 RNA polymerase.

Authors:  Y H Chen; D F Bogenhagen
Journal:  J Biol Chem       Date:  1993-03-15       Impact factor: 5.157

10.  SII-facilitated transcript cleavage in RNA polymerase II complexes stalled early after initiation occurs in primarily dinucleotide increments.

Authors:  M G Izban; D S Luse
Journal:  J Biol Chem       Date:  1993-06-15       Impact factor: 5.157

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  34 in total

1.  Mechanism of translesion transcription by RNA polymerase II and its role in cellular resistance to DNA damage.

Authors:  Celine Walmacq; Alan C M Cheung; Maria L Kireeva; Lucyna Lubkowska; Chengcheng Ye; Deanna Gotte; Jeffrey N Strathern; Thomas Carell; Patrick Cramer; Mikhail Kashlev
Journal:  Mol Cell       Date:  2012-03-08       Impact factor: 17.970

Review 2.  RNA polymerase between lesion bypass and DNA repair.

Authors:  Alexandra M Deaconescu
Journal:  Cell Mol Life Sci       Date:  2013-06-27       Impact factor: 9.261

3.  Mechanism of DNA alkylation-induced transcriptional stalling, lesion bypass, and mutagenesis.

Authors:  Liang Xu; Wei Wang; Jiabin Wu; Ji Hyun Shin; Pengcheng Wang; Ilona Christy Unarta; Jenny Chong; Yinsheng Wang; Dong Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-07       Impact factor: 11.205

4.  8-Oxo-guanine DNA damage induces transcription errors by escaping two distinct fidelity control checkpoints of RNA polymerase II.

Authors:  Kirill A Konovalov; Fátima Pardo-Avila; Carmen Ka Man Tse; Juntaek Oh; Dong Wang; Xuhui Huang
Journal:  J Biol Chem       Date:  2019-02-04       Impact factor: 5.157

5.  Understanding the Molecular Basis of RNA Polymerase II Transcription.

Authors:  Su Zhang; Dong Wang
Journal:  Isr J Chem       Date:  2013-06       Impact factor: 3.333

Review 6.  Molecular basis of transcriptional fidelity and DNA lesion-induced transcriptional mutagenesis.

Authors:  Liang Xu; Linati Da; Steven W Plouffe; Jenny Chong; Eric Kool; Dong Wang
Journal:  DNA Repair (Amst)       Date:  2014-04-21

7.  RNA polymerase II acts as a selective sensor for DNA lesions and endogenous DNA modifications.

Authors:  Ji Hyun Shin; Liang Xu; Dong Wang
Journal:  Transcription       Date:  2016-04-22

Review 8.  Transcriptional mutagenesis: causes and involvement in tumour development.

Authors:  Damien Brégeon; Paul W Doetsch
Journal:  Nat Rev Cancer       Date:  2011-03       Impact factor: 60.716

Review 9.  RNA polymerase II transcriptional fidelity control and its functional interplay with DNA modifications.

Authors:  Liang Xu; Wei Wang; Jenny Chong; Ji Hyun Shin; Jun Xu; Dong Wang
Journal:  Crit Rev Biochem Mol Biol       Date:  2015-09-22       Impact factor: 8.250

10.  Lineage-specific variations in the trigger loop modulate RNA proofreading by bacterial RNA polymerases.

Authors:  Daria Esyunina; Matti Turtola; Danil Pupov; Irina Bass; Saulius Klimašauskas; Georgiy Belogurov; Andrey Kulbachinskiy
Journal:  Nucleic Acids Res       Date:  2016-01-04       Impact factor: 16.971

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