Literature DB >> 19725733

Elastic scattering spectroscopy for detection of cancer risk in Barrett's esophagus: experimental and clinical validation of error removal by orthogonal subtraction for increasing accuracy.

Ying Zhu1, Tom Fearn, Gary Mackenzie, Ben Clark, Jason M Dunn, Irving J Bigio, Stephen G Bown, Laurence B Lovat.   

Abstract

Elastic scattering spectroscopy (ESS) may be used to detect high-grade dysplasia (HGD) or cancer in Barrett's esophagus (BE). When spectra are measured in vivo by a hand-held optical probe, variability among replicated spectra from the same site can hinder the development of a diagnostic model for cancer risk. An experiment was carried out on excised tissue to investigate how two potential sources of this variability, pressure and angle, influence spectral variability, and the results were compared with the variations observed in spectra collected in vivo from patients with Barrett's esophagus. A statistical method called error removal by orthogonal subtraction (EROS) was applied to model and remove this measurement variability, which accounted for 96.6% of the variation in the spectra, from the in vivo data. Its removal allowed the construction of a diagnostic model with specificity improved from 67% to 82% (with sensitivity fixed at 90%). The improvement was maintained in predictions on an independent in vivo data set. EROS works well as an effective pretreatment for Barrett's in vivo data by identifying measurement variability and ameliorating its effect. The procedure reduces the complexity and increases the accuracy and interpretability of the model for classification and detection of cancer risk in Barrett's esophagus.

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Year:  2009        PMID: 19725733      PMCID: PMC2849300          DOI: 10.1117/1.3194291

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  26 in total

1.  Light scattering from cells: the contribution of the nucleus and the effects of proliferative status.

Authors:  J R Mourant; M Canpolat; C Brocker; O Esponda-Ramos; T M Johnson; A Matanock; K Stetter; J P Freyer
Journal:  J Biomed Opt       Date:  2000-04       Impact factor: 3.170

2.  Detection of preinvasive cancer cells.

Authors:  V Backman; M B Wallace; L T Perelman; J T Arendt; R Gurjar; M G Müller; Q Zhang; G Zonios; E Kline; J A McGilligan; S Shapshay; T Valdez; K Badizadegan; J M Crawford; M Fitzmaurice; S Kabani; H S Levin; M Seiler; R R Dasari; I Itzkan; J Van Dam; M S Feld; T McGillican
Journal:  Nature       Date:  2000-07-06       Impact factor: 49.962

Review 3.  Elastic scattering spectroscopy for detection of dysplasia in Barrett's esophagus.

Authors:  Laurence Lovat; Stephen Bown
Journal:  Gastrointest Endosc Clin N Am       Date:  2004-07

Review 4.  Spectroscopic sensing of cancer and cancer therapy: current status of translational research.

Authors:  Irving J Bigio; Stephen G Bown
Journal:  Cancer Biol Ther       Date:  2004-03-16       Impact factor: 4.742

5.  Electrical bioimpedance readings increase with higher pressure applied to the measuring probe.

Authors:  C A González-Correa; B H Brown; R H Smallwood; D C Walker; K D Bardhan
Journal:  Physiol Meas       Date:  2005-03-29       Impact factor: 2.833

6.  Analysis of changes in reflectance measurements on biological tissues subjected to different probe pressures.

Authors:  Roberto Reif; Mark S Amorosino; Katherine W Calabro; Ousama A'Amar; Satish K Singh; Irving J Bigio
Journal:  J Biomed Opt       Date:  2008 Jan-Feb       Impact factor: 3.170

7.  Endoscopic fluorescence detection of dysplasia in patients with Barrett's esophagus, ulcerative colitis, or adenomatous polyps after 5-aminolevulinic acid-induced protoporphyrin IX sensitization.

Authors:  H Messmann; R Knüchel; W Bäumler; A Holstege; J Schölmerich
Journal:  Gastrointest Endosc       Date:  1999-01       Impact factor: 9.427

8.  Predictors of progression in Barrett's esophagus III: baseline flow cytometric variables.

Authors:  P S Rabinovitch; G Longton; P L Blount; D S Levine; B J Reid
Journal:  Am J Gastroenterol       Date:  2001-11       Impact factor: 10.864

9.  Barrett's esophagus: development of dysplasia and adenocarcinoma.

Authors:  W Hameeteman; G N Tytgat; H J Houthoff; J G van den Tweel
Journal:  Gastroenterology       Date:  1989-05       Impact factor: 22.682

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  15 in total

Review 1.  Barrett's esophagus with high-grade dysplasia: focus on current treatment options.

Authors:  Leonidas Lekakos; Nikolaos P Karidis; Dimitrios Dimitroulis; Christos Tsigris; Gregory Kouraklis; Nikolaos Nikiteas
Journal:  World J Gastroenterol       Date:  2011-10-07       Impact factor: 5.742

2.  Scanning elastic scattering spectroscopy detects metastatic breast cancer in sentinel lymph nodes.

Authors:  Martin R Austwick; Benjamin Clark; Charles A Mosse; Kristie Johnson; D Wayne Chicken; Santosh K Somasundaram; Katherine W Calabro; Ying Zhu; Mary Falzon; Gabrijela Kocjan; Tom Fearn; Stephen G Bown; Irving J Bigio; Mohammed R S Keshtgar
Journal:  J Biomed Opt       Date:  2010 Jul-Aug       Impact factor: 3.170

3.  Image-Guided Biopsy in the Era of Personalized Cancer Care: Proceedings from the Society of Interventional Radiology Research Consensus Panel.

Authors:  Alda L Tam; Howard J Lim; Ignacio I Wistuba; Anobel Tamrazi; Michael D Kuo; Etay Ziv; Stephen Wong; Albert J Shih; Robert J Webster; Gregory S Fischer; Sunitha Nagrath; Suzanne E Davis; Sarah B White; Kamran Ahrar
Journal:  J Vasc Interv Radiol       Date:  2015-11-25       Impact factor: 3.464

4.  Probe pressure effects on human skin diffuse reflectance and fluorescence spectroscopy measurements.

Authors:  Liang Lim; Brandon Nichols; Narasimhan Rajaram; James W Tunnell
Journal:  J Biomed Opt       Date:  2011 Jan-Feb       Impact factor: 3.170

5.  Fiber-based visible and near infrared optical coherence tomography (vnOCT) enables quantitative elastic light scattering spectroscopy in human retina.

Authors:  Weiye Song; Libo Zhou; Sui Zhang; Steven Ness; Manishi Desai; Ji Yi
Journal:  Biomed Opt Express       Date:  2018-06-28       Impact factor: 3.732

6.  Spectral classifier design with ensemble classifiers and misclassification-rejection: application to elastic-scattering spectroscopy for detection of colonic neoplasia.

Authors:  Eladio Rodriguez-Diaz; David A Castanon; Satish K Singh; Irving J Bigio
Journal:  J Biomed Opt       Date:  2011-06       Impact factor: 3.170

7.  Algorithm for automated selection of application-specific fiber-optic reflectance probes.

Authors:  Andrew J Gomes; Vadim Backman
Journal:  J Biomed Opt       Date:  2013-02       Impact factor: 3.170

8.  Plum pudding random medium model of biological tissue toward remote microscopy from spectroscopic light scattering.

Authors:  Min Xu
Journal:  Biomed Opt Express       Date:  2017-05-04       Impact factor: 3.732

9.  Elastic scattering spectroscopy as an optical marker of inflammatory bowel disease activity and subtypes.

Authors:  Eladio Rodriguez-Diaz; Christopher Atkinson; Lisa I Jepeal; Adam Berg; Christopher S Huang; Sandra R Cerda; Michael J OʼBrien; Irving J Bigio; Francis A Farraye; Satish K Singh
Journal:  Inflamm Bowel Dis       Date:  2014-06       Impact factor: 5.325

10.  Endoscopic histological assessment of colonic polyps by using elastic scattering spectroscopy.

Authors:  Eladio Rodriguez-Diaz; Qin Huang; Sandra R Cerda; Michael J O'Brien; Irving J Bigio; Satish K Singh
Journal:  Gastrointest Endosc       Date:  2014-09-23       Impact factor: 9.427

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