Literature DB >> 21721830

Spectral classifier design with ensemble classifiers and misclassification-rejection: application to elastic-scattering spectroscopy for detection of colonic neoplasia.

Eladio Rodriguez-Diaz1, David A Castanon, Satish K Singh, Irving J Bigio.   

Abstract

Optical spectroscopy has shown potential as a real-time, in vivo, diagnostic tool for identifying neoplasia during endoscopy. We present the development of a diagnostic algorithm to classify elastic-scattering spectroscopy (ESS) spectra as either neoplastic or non-neoplastic. The algorithm is based on pattern recognition methods, including ensemble classifiers, in which members of the ensemble are trained on different regions of the ESS spectrum, and misclassification-rejection, where the algorithm identifies and refrains from classifying samples that are at higher risk of being misclassified. These "rejected" samples can be reexamined by simply repositioning the probe to obtain additional optical readings or ultimately by sending the polyp for histopathological assessment, as per standard practice. Prospective validation using separate training and testing sets result in a baseline performance of sensitivity = .83, specificity = .79, using the standard framework of feature extraction (principal component analysis) followed by classification (with linear support vector machines). With the developed algorithm, performance improves to Se ∼ 0.90, Sp ∼ 0.90, at a cost of rejecting 20-33% of the samples. These results are on par with a panel of expert pathologists. For colonoscopic prevention of colorectal cancer, our system could reduce biopsy risk and cost, obviate retrieval of non-neoplastic polyps, decrease procedure time, and improve assessment of cancer risk.

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Year:  2011        PMID: 21721830      PMCID: PMC3133803          DOI: 10.1117/1.3592488

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  34 in total

Review 1.  Elastic scattering spectroscopy for detection of dysplasia in Barrett's esophagus.

Authors:  Laurence Lovat; Stephen Bown
Journal:  Gastrointest Endosc Clin N Am       Date:  2004-07

2.  Analytical model of light reflectance for extraction of the optical properties in small volumes of turbid media.

Authors:  Roberto Reif; Ousama A'Amar; Irving J Bigio
Journal:  Appl Opt       Date:  2007-10-10       Impact factor: 1.980

Review 3.  Cancer screening in the United States, 2009: a review of current American Cancer Society guidelines and issues in cancer screening.

Authors:  Robert A Smith; Vilma Cokkinides; Otis W Brawley
Journal:  CA Cancer J Clin       Date:  2009 Jan-Feb       Impact factor: 508.702

4.  Elastic scattering spectroscopy as a diagnostic tool for differentiating pathologies in the gastrointestinal tract: preliminary testing.

Authors:  J R Mourant; I J Bigio; J D Boyer; T M Johnson; J Lacey; A G Bohorfoush Iii; M H Mellow
Journal:  J Biomed Opt       Date:  1996-04       Impact factor: 3.170

5.  Cervical precancer detection using a multivariate statistical algorithm based on laser-induced fluorescence spectra at multiple excitation wavelengths.

Authors:  N Ramanujam; M F Mitchell; A Mahadevan-Jansen; S L Thomsen; G Staerkel; A Malpica; T Wright; N Atkinson; R Richards-Kortum
Journal:  Photochem Photobiol       Date:  1996-10       Impact factor: 3.421

6.  Relevance vector machine for optical diagnosis of cancer.

Authors:  Shovan K Majumder; Nirmalya Ghosh; Pradeep K Gupta
Journal:  Lasers Surg Med       Date:  2005-04       Impact factor: 4.025

7.  Elastic scattering spectroscopy for the diagnosis of colonic lesions: initial results of a novel optical biopsy technique.

Authors:  Anjan Dhar; Kristie S Johnson; Marco R Novelli; Stephen G Bown; Irving J Bigio; Laurence B Lovat; Stuart L Bloom
Journal:  Gastrointest Endosc       Date:  2006-02       Impact factor: 9.427

8.  Development of a multivariate statistical algorithm to analyze human cervical tissue fluorescence spectra acquired in vivo.

Authors:  N Ramanujam; M F Mitchell; A Mahadevan; S Thomsen; A Malpica; T Wright; N Atkinson; R Richards-Kortum
Journal:  Lasers Surg Med       Date:  1996       Impact factor: 4.025

9.  Colonoscopic miss rates determined by direct comparison of colonoscopy with colon resection specimens.

Authors:  Georges Postic; David Lewin; Charles Bickerstaff; Michael B Wallace
Journal:  Am J Gastroenterol       Date:  2002-12       Impact factor: 10.864

10.  Comparison of multiexcitation fluorescence and diffuse reflectance spectroscopy for the diagnosis of breast cancer (March 2003).

Authors:  Gregory M Palmer; Changfang Zhu; Tara M Breslin; Fushen Xu; Kennedy W Gilchrist; Nirmala Ramanujam
Journal:  IEEE Trans Biomed Eng       Date:  2003-11       Impact factor: 4.538

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  7 in total

1.  Image-Guided Biopsy in the Era of Personalized Cancer Care: Proceedings from the Society of Interventional Radiology Research Consensus Panel.

Authors:  Alda L Tam; Howard J Lim; Ignacio I Wistuba; Anobel Tamrazi; Michael D Kuo; Etay Ziv; Stephen Wong; Albert J Shih; Robert J Webster; Gregory S Fischer; Sunitha Nagrath; Suzanne E Davis; Sarah B White; Kamran Ahrar
Journal:  J Vasc Interv Radiol       Date:  2015-11-25       Impact factor: 3.464

Review 2.  Influence of the phase function in generalized diffuse reflectance models: review of current formalisms and novel observations.

Authors:  Katherine W Calabro; Irving J Bigio
Journal:  J Biomed Opt       Date:  2014       Impact factor: 3.170

3.  Elastic scattering spectroscopy as an optical marker of inflammatory bowel disease activity and subtypes.

Authors:  Eladio Rodriguez-Diaz; Christopher Atkinson; Lisa I Jepeal; Adam Berg; Christopher S Huang; Sandra R Cerda; Michael J OʼBrien; Irving J Bigio; Francis A Farraye; Satish K Singh
Journal:  Inflamm Bowel Dis       Date:  2014-06       Impact factor: 5.325

4.  Endoscopic histological assessment of colonic polyps by using elastic scattering spectroscopy.

Authors:  Eladio Rodriguez-Diaz; Qin Huang; Sandra R Cerda; Michael J O'Brien; Irving J Bigio; Satish K Singh
Journal:  Gastrointest Endosc       Date:  2014-09-23       Impact factor: 9.427

5.  Computer-assisted assessment of colonic polyp histopathology using probe-based confocal laser endomicroscopy.

Authors:  Pushpak Taunk; Christopher D Atkinson; David Lichtenstein; Eladio Rodriguez-Diaz; Satish K Singh
Journal:  Int J Colorectal Dis       Date:  2019-11-06       Impact factor: 2.571

6.  Spectral response of optical fiber probe with closely spaced fibers.

Authors:  Steven L Jacques
Journal:  Quant Imaging Med Surg       Date:  2021-03

Review 7.  Development of artificial intelligence technology in diagnosis, treatment, and prognosis of colorectal cancer.

Authors:  Feng Liang; Shu Wang; Kai Zhang; Tong-Jun Liu; Jian-Nan Li
Journal:  World J Gastrointest Oncol       Date:  2022-01-15
  7 in total

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