Literature DB >> 19688607

Population genetic study of four closely-linked X-STR trios in Koreans.

Jeong Eun Sim1, Hwan Young Lee, Woo Ick Yang, Kyoung-Jin Shin.   

Abstract

We investigated four X chromosomal short tandem repeat (X-STR) markers (DXS10079, DXS10103, DXS10146, and DXS10148) in 450 unrelated Koreans (300 males and 150 females), and evaluated their forensic usage in relation to the four X-STR linkage groups. Forensic statistical parameters for these X-STR markers indicated that they are highly informative for forensic application in Koreans. No significant deviations from Hardy-Weinberg equilibrium were observed in any of the four X-STR markers. In addition, we present haplotypes and their frequency data for four linkage groups each comprised of three X-STRs (DXS10148-DXS10135-DXS8378, DXS7132-DXS10079-DXS10074, DXS10103-HPRTB-DXS10101, and DXS10146-DXS10134-DXS7423) in 300 males. Haplotype diversity values in the four linkage trios were all higher than 0.98, and 77.1% of all haplotypes showed a frequency less than 0.01. Therefore, the four closely-linked X-STR trios will contribute to complex kinship testing in Koreans.

Mesh:

Year:  2009        PMID: 19688607     DOI: 10.1007/s11033-009-9733-x

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  15 in total

1.  Validation of the STR DXS7424 and the linkage situation on the X-chromosome.

Authors:  Jeanett Edelmann; Sandra Hering; Eberhard Kuhlisch; Reinhard Szibor
Journal:  Forensic Sci Int       Date:  2002-02-18       Impact factor: 2.395

Review 2.  Use of X-linked markers for forensic purposes.

Authors:  R Szibor; M Krawczak; S Hering; J Edelmann; E Kuhlisch; D Krause
Journal:  Int J Legal Med       Date:  2003-02-15       Impact factor: 2.686

3.  DXS10079, DXS10074 and DXS10075 are STRs located within a 280-kb region of Xq12 and provide stable haplotypes useful for complex kinship cases.

Authors:  Sandra Hering; Christa Augustin; Jeanett Edelmann; Micaela Heidel; Jan Dressler; Heike Rodig; Eberhard Kuhlisch; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2005-12-13       Impact factor: 2.686

4.  Population genetic evaluation of eight X-chromosomal short tandem repeat loci using Mentype Argus X-8 PCR amplification kit.

Authors:  Dorit Becker; Heike Rodig; Christa Augustin; Jeanett Edelmann; Frank Götz; Sandra Hering; Reinhard Szibor; Werner Brabetz
Journal:  Forensic Sci Int Genet       Date:  2007-09-29       Impact factor: 4.882

Review 5.  X-chromosomal markers: past, present and future.

Authors:  Reinhard Szibor
Journal:  Forensic Sci Int Genet       Date:  2007-04-27       Impact factor: 4.882

6.  Analysis of linkage and linkage disequilibrium for eight X-STR markers.

Authors:  Andreas O Tillmar; Petter Mostad; Thore Egeland; Bertil Lindblom; Gunilla Holmlund; Kerstin Montelius
Journal:  Forensic Sci Int Genet       Date:  2008-10-26       Impact factor: 4.882

7.  The STR cluster DXS10148-DXS8378-DXS10135 provides a powerful tool for X-chromosomal haplotyping at Xp22.

Authors:  Tanja Hundertmark; Sandra Hering; Jeanett Edelmann; Christa Augustin; Ines Plate; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2008-08-08       Impact factor: 2.686

8.  Hungarian population data of eight X-linked markers in four linkage groups.

Authors:  Andrea Zalán; Antónia Völgyi; Werner Brabetz; Dorit Schleinitz; Horolma Pamjav
Journal:  Forensic Sci Int       Date:  2007-06-22       Impact factor: 2.395

9.  Validation of six closely linked STRs located in the chromosome X centromere region.

Authors:  Jeanett Edelmann; Sandra Hering; Christa Augustin; Stefan Kalis; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2009-02-20       Impact factor: 2.686

10.  Genetic polymorphism and haplotype analysis of 4 tightly linked X-STR duos in Koreans.

Authors:  Eun Jin Lim; Hwan Young Lee; Jeong Eun Sim; Woo Ick Yang; Kyoung-Jin Shin
Journal:  Croat Med J       Date:  2009-06       Impact factor: 1.351

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  7 in total

1.  A genetic investigation of Korean mummies from the Joseon Dynasty.

Authors:  Na Young Kim; Hwan Young Lee; Myung Jin Park; Woo Ick Yang; Kyoung-Jin Shin
Journal:  Mol Biol Rep       Date:  2010-03-21       Impact factor: 2.316

2.  Genetic analysis of the 10 ChrX STRs loci in Chinese Han nationality from Guangdong province.

Authors:  Qiu-Ling Liu; De-Jian Lu; Wei-Wei Wu; Hong-Lei Hao; Ye-Fei Chen; Hu Zhao
Journal:  Mol Biol Rep       Date:  2010-12-14       Impact factor: 2.316

3.  Genetic study of 12 X-STRs in Malay population living in and around Kuala Lumpur using Investigator Argus X-12 kit.

Authors:  Michinaga Samejima; Yasutaka Nakamura; Phrabhakaran Nambiar; Kiyoshi Minaguchi
Journal:  Int J Legal Med       Date:  2012-05-15       Impact factor: 2.686

4.  Population genetic study of six closely linked groups of X-STRs in a Japanese population.

Authors:  Michinaga Samejima; Yasutaka Nakamura; Kiyoshi Minaguchi
Journal:  Int J Legal Med       Date:  2011-09-15       Impact factor: 2.686

5.  Analysis of 12 X-STR loci in the population of south Croatia.

Authors:  Gordan Mršić; Petar Ozretić; Josip Crnjac; Siniša Merkaš; Ivana Račić; Sara Rožić; Viktorija Sukser; Maja Popović; Marina Korolija
Journal:  Mol Biol Rep       Date:  2017-01-09       Impact factor: 2.316

6.  Genetic analysis of twelve X-chromosomal STRs in Japanese and Chinese populations.

Authors:  Seisaku Uchigasaki; Jian Tie; Daisuke Takahashi
Journal:  Mol Biol Rep       Date:  2012-12-30       Impact factor: 2.316

7.  Identification of Potential Genes for Benign Prostatic Hyperplasia and Prostate Cancer Susceptibility in Four X-chromosome Regions with High Frequency of Microvariant Alleles.

Authors:  Mohammed H Albujja; Safia A Messaudi; Ramachandran Vasudevan; Saleh Al Ghamdi; Pei Pei Chong; Khairul Asri Ghani; Yazan Ranneh; Mohammed Alaidarous; Patimah Ismail
Journal:  Asian Pac J Cancer Prev       Date:  2020-08-01
  7 in total

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