Literature DB >> 19679507

Statistical models of sets of curves and surfaces based on currents.

Stanley Durrleman1, Xavier Pennec, Alain Trouvé, Nicholas Ayache.   

Abstract

Computing, visualizing and interpreting statistics on shapes like curves or surfaces is a real challenge with many applications ranging from medical image analysis to computer graphics. Modeling such geometrical primitives with currents avoids to base the comparison between primitives either on a selection of geometrical measures (like length, area or curvature) or on the assumption of point-correspondence. This framework has been used relevantly to register brain surfaces or to measure geometrical invariants. However, while the state-of-the-art methods efficiently perform pairwise registrations, new numerical schemes are required to process groupwise statistics due to an increasing complexity when the size of the database is growing. In this paper, we propose a Matching Pursuit Algorithm for currents, which allows us to approximate, at any desired accuracy, the mean and modes of a population of geometrical primitives modeled as currents. This leads to a sparse representation of the currents, which offers a way to visualize, and hence to interpret, such statistics. More importantly, this tool allows us to build atlases from a population of currents, based on a rigorous statistical model. In this model, data are seen as deformations of an unknown template perturbed by random currents. A Maximum A Posteriori approach is used to estimate consistently the template, the deformations of this template to each data and the residual perturbations. Statistics on both the deformations and the residual currents provide a complete description of the geometrical variability of the structures. Eventually, this framework is generic and can be applied to a large range of anatomical data. We show the relevance of our approach by describing the variability of population of sulcal lines, surfaces of internal structures of the brain and white matter fiber bundles. Complementary experiments on simulated data show the potential of the method to give anatomical characterization of pathologies in the context of supervised learning.

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Year:  2009        PMID: 19679507     DOI: 10.1016/j.media.2009.07.007

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  32 in total

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Review 2.  Deformable medical image registration: a survey.

Authors:  Aristeidis Sotiras; Christos Davatzikos; Nikos Paragios
Journal:  IEEE Trans Med Imaging       Date:  2013-05-31       Impact factor: 10.048

3.  The developing human connectome project: A minimal processing pipeline for neonatal cortical surface reconstruction.

Authors:  Antonios Makropoulos; Emma C Robinson; Andreas Schuh; Robert Wright; Sean Fitzgibbon; Jelena Bozek; Serena J Counsell; Johannes Steinweg; Katy Vecchiato; Jonathan Passerat-Palmbach; Gregor Lenz; Filippo Mortari; Tencho Tenev; Eugene P Duff; Matteo Bastiani; Lucilio Cordero-Grande; Emer Hughes; Nora Tusor; Jacques-Donald Tournier; Jana Hutter; Anthony N Price; Rui Pedro A G Teixeira; Maria Murgasova; Suresh Victor; Christopher Kelly; Mary A Rutherford; Stephen M Smith; A David Edwards; Joseph V Hajnal; Mark Jenkinson; Daniel Rueckert
Journal:  Neuroimage       Date:  2018-01-31       Impact factor: 6.556

4.  Topography-Based Registration of Developing Cortical Surfaces in Infants Using Multidirectional Varifold Representation.

Authors:  Islem Rekik; Gang Li; Weili Lin; Dinggang Shen
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5.  Fusion of white and gray matter geometry: a framework for investigating brain development.

Authors:  Peter Savadjiev; Yogesh Rathi; Sylvain Bouix; Alex R Smith; Robert T Schultz; Ragini Verma; Carl-Fredrik Westin
Journal:  Med Image Anal       Date:  2014-07-08       Impact factor: 8.545

6.  Optimal data-driven sparse parameterization of diffeomorphisms for population analysis.

Authors:  Sandy Durrleman; Marcel Prastawa; Guido Gerig; Sarang Joshi
Journal:  Inf Process Med Imaging       Date:  2011

Review 7.  Advances in computational and statistical diffusion MRI.

Authors:  Lauren J O'Donnell; Alessandro Daducci; Demian Wassermann; Christophe Lenglet
Journal:  NMR Biomed       Date:  2017-11-14       Impact factor: 4.044

8.  Diffeomorphometry and geodesic positioning systems for human anatomy.

Authors:  Michael I Miller; Laurent Younes; Alain Trouvé
Journal:  Technology (Singap World Sci)       Date:  2014-03

9.  Construction of 4D infant cortical surface atlases with sharp folding patterns via spherical patch-based group-wise sparse representation.

Authors:  Zhengwang Wu; Li Wang; Weili Lin; John H Gilmore; Gang Li; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2019-05-21       Impact factor: 5.038

10.  Multidirectional and Topography-based Dynamic-scale Varifold Representations with Application to Matching Developing Cortical Surfaces.

Authors:  Islem Rekik; Gang Li; Weili Lin; Dinggang Shen
Journal:  Neuroimage       Date:  2016-04-30       Impact factor: 6.556

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