Literature DB >> 19668855

Assessment of helical interfaces in protein-protein interactions.

Andrea L Jochim1, Paramjit S Arora.   

Abstract

Herein we identify and analyze helical protein interfaces as potential targets for synthetic modulators of protein-protein interactions.

Entities:  

Mesh：

Substances：

Year:  2009        PMID： 19668855      PMCID： PMC4575789          DOI： 10.1039/b903202a

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN： 1742-2051


  16 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Clustering of highly homologous sequences to reduce the size of large protein databases.

Authors:  W Li; L Jaroszewski; A Godzik
Journal:  Bioinformatics       Date:  2001-03       Impact factor: 6.937

3.  Native protein sequences are close to optimal for their structures.

Authors:  B Kuhlman; D Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2000-09-12       Impact factor: 11.205

Review 4.  How many drug targets are there?

Authors:  John P Overington; Bissan Al-Lazikani; Andrew L Hopkins
Journal:  Nat Rev Drug Discov       Date:  2006-12       Impact factor: 84.694

Review 5.  Targeting protein-protein interactions: lessons from p53/MDM2.

Authors:  Justin K Murray; Samuel H Gellman
Journal:  Biopolymers       Date:  2007       Impact factor: 2.505

Review 6.  Principles of protein-protein interactions: what are the preferred ways for proteins to interact?

Authors:  Ozlem Keskin; Attila Gursoy; Buyong Ma; Ruth Nussinov
Journal:  Chem Rev       Date:  2008-03-21       Impact factor: 60.622

Review 7.  Insights for the development of specific kinase inhibitors by targeted structural genomics.

Authors:  Oleg Fedorov; Michael Sundström; Brian Marsden; Stefan Knapp
Journal:  Drug Discov Today       Date:  2007-03-29       Impact factor: 7.851

8.  The atomic structure of protein-protein recognition sites.

Authors:  L Lo Conte; C Chothia; J Janin
Journal:  J Mol Biol       Date:  1999-02-05       Impact factor: 5.469

9.  The structure of interfaces between subunits of dimeric and tetrameric proteins.

Authors:  S Miller
Journal:  Protein Eng       Date:  1989-11

Review 10.  Protein-protein interactions: a review of protein dimer structures.

Authors:  S Jones; J M Thornton
Journal:  Prog Biophys Mol Biol       Date:  1995       Impact factor: 3.667
View more
  49 in total

1.  Extending foldamer design beyond α-helix mimicry: α/β-peptide inhibitors of vascular endothelial growth factor signaling.

Authors:  Holly S Haase; Kimberly J Peterson-Kaufman; Sheeny K Lan Levengood; James W Checco; William L Murphy; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2012-05-01       Impact factor: 15.419

2.  High-resolution structures of a heterochiral coiled coil.

Authors:  David E Mortenson; Jay D Steinkruger; Dale F Kreitler; Dominic V Perroni; Gregory P Sorenson; Lijun Huang; Ritesh Mittal; Hyun Gi Yun; Benjamin R Travis; Mahesh K Mahanthappa; Katrina T Forest; Samuel H Gellman
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-12       Impact factor: 11.205

Review 3.  Targeting recognition surfaces on natural proteins with peptidic foldamers.

Authors:  James W Checco; Samuel H Gellman
Journal:  Curr Opin Struct Biol       Date:  2016-07-05       Impact factor: 6.809

4.  α/β-Peptide Foldamers Targeting Intracellular Protein-Protein Interactions with Activity in Living Cells.

Authors:  James W Checco; Erinna F Lee; Marco Evangelista; Nerida J Sleebs; Kelly Rogers; Anne Pettikiriarachchi; Nadia J Kershaw; Geoffrey A Eddinger; David G Belair; Julia L Wilson; Chelcie H Eller; Ronald T Raines; William L Murphy; Brian J Smith; Samuel H Gellman; W Douglas Fairlie
Journal:  J Am Chem Soc       Date:  2015-08-28       Impact factor: 15.419

5.  Solid-phase synthesis of short α-helices stabilized by the hydrogen bond surrogate approach.

Authors:  Anupam Patgiri; Monica Z Menzenski; Andrew B Mahon; Paramjit S Arora
Journal:  Nat Protoc       Date:  2010-10-28       Impact factor: 13.491

6.  Synthesis of a tetrasubstituted tetrahydronaphthalene scaffold for α-helix mimicry via a MgBr2-catalyzed Friedel-Crafts epoxide cycloalkylation.

Authors:  Devan Naduthambi; Santosh Bhor; Michael B Elbaum; Neal J Zondlo
Journal:  Org Lett       Date:  2013-09-09       Impact factor: 6.005

7.  Synthesis of hydrogen-bond surrogate α-helices as inhibitors of protein-protein interactions.

Authors:  Stephen E Miller; Paul F Thomson; Paramjit S Arora
Journal:  Curr Protoc Chem Biol       Date:  2014-06-03

8.  Side-Chain Conformational Preferences Govern Protein-Protein Interactions.

Authors:  Andrew M Watkins; Richard Bonneau; Paramjit S Arora
Journal:  J Am Chem Soc       Date:  2016-08-09       Impact factor: 15.419

9.  A two-component 'double-click' approach to peptide stapling.

Authors:  Yu Heng Lau; Yuteng Wu; Peterson de Andrade; Warren R J D Galloway; David R Spring
Journal:  Nat Protoc       Date:  2015-03-12       Impact factor: 13.491

10.  Differential impact of β and γ residue preorganization on α/β/γ-peptide helix stability in water.

Authors:  Young-Hee Shin; David E Mortenson; Kenneth A Satyshur; Katrina T Forest; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2013-05-23       Impact factor: 15.419
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.