Literature DB >> 18940922

Role of HAMP domains in chemotaxis signaling by bacterial chemoreceptors.

Cezar M Khursigara1, Xiongwu Wu, Peijun Zhang, Jonathan Lefman, Sriram Subramaniam.   

Abstract

Bacterial chemoreceptors undergo conformational changes in response to variations in the concentration of extracellular ligands. These changes in chemoreceptor structure initiate a series of signaling events that ultimately result in regulation of rotation of the flagellar motor. Here we have used cryo-electron tomography combined with 3D averaging to determine the in situ structure of chemoreceptor assemblies in Escherichia coli cells that have been engineered to overproduce the serine chemoreceptor Tsr. We demonstrate that chemoreceptors are organized as trimers of receptor dimers and display two distinct conformations that differ principally in arrangement of the HAMP domains within each trimer. Ligand binding and methylation alter the distribution of chemoreceptors between the two conformations, with serine binding favoring the "expanded" conformation and chemoreceptor methylation favoring the "compact" conformation. The distinct positions of chemoreceptor HAMP domains within the context of a trimeric unit are thus likely to represent important aspects of chemoreceptor structural changes relevant to chemotaxis signaling. Based on these results, we propose that the compact and expanded conformations represent the "kinase-on" and "kinase-off" states of chemoreceptor trimers, respectively.

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Year:  2008        PMID: 18940922      PMCID: PMC2570609          DOI: 10.1073/pnas.0806401105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Four-helical-bundle structure of the cytoplasmic domain of a serine chemotaxis receptor.

Authors:  K K Kim; H Yokota; S H Kim
Journal:  Nature       Date:  1999-08-19       Impact factor: 49.962

Review 2.  Making sense of it all: bacterial chemotaxis.

Authors:  George H Wadhams; Judith P Armitage
Journal:  Nat Rev Mol Cell Biol       Date:  2004-12       Impact factor: 94.444

3.  Adaptation mechanism of the aspartate receptor: electrostatics of the adaptation subdomain play a key role in modulating kinase activity.

Authors:  Diane J Starrett; Joseph J Falke
Journal:  Biochemistry       Date:  2005-02-08       Impact factor: 3.162

4.  Apo structure of the ligand-binding domain of aspartate receptor from Escherichia coli and its comparison with ligand-bound or pseudoligand-bound structures.

Authors:  Y I Chi; H Yokota; S H Kim
Journal:  FEBS Lett       Date:  1997-09-08       Impact factor: 4.124

5.  Molecular mechanism of transmembrane signaling by the aspartate receptor: a model.

Authors:  S A Chervitz; J J Falke
Journal:  Proc Natl Acad Sci U S A       Date:  1996-03-19       Impact factor: 11.205

6.  High-resolution structures of the ligand binding domain of the wild-type bacterial aspartate receptor.

Authors:  J I Yeh; H P Biemann; G G Privé; J Pandit; D E Koshland; S H Kim
Journal:  J Mol Biol       Date:  1996-09-20       Impact factor: 5.469

7.  Three-dimensional structures of the ligand-binding domain of the bacterial aspartate receptor with and without a ligand.

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Journal:  Science       Date:  1991-11-29       Impact factor: 47.728

8.  Conserved glycine residues in the cytoplasmic domain of the aspartate receptor play essential roles in kinase coupling and on-off switching.

Authors:  Matthew D Coleman; Randal B Bass; Ryan S Mehan; Joseph J Falke
Journal:  Biochemistry       Date:  2005-05-31       Impact factor: 3.162

9.  Detection of a conserved alpha-helix in the kinase-docking region of the aspartate receptor by cysteine and disulfide scanning.

Authors:  R B Bass; J J Falke
Journal:  J Biol Chem       Date:  1998-09-25       Impact factor: 5.157

10.  Signaling domain of the aspartate receptor is a helical hairpin with a localized kinase docking surface: cysteine and disulfide scanning studies.

Authors:  R B Bass; M D Coleman; J J Falke
Journal:  Biochemistry       Date:  1999-07-20       Impact factor: 3.162

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  39 in total

1.  Mistic and TarCF as fusion protein partners for functional expression of the cannabinoid receptor 2 in Escherichia coli.

Authors:  Ananda Chowdhury; Rentian Feng; Qin Tong; Yuxun Zhang; Xiang-Qun Xie
Journal:  Protein Expr Purif       Date:  2012-03-03       Impact factor: 1.650

2.  HAMP domain signal relay mechanism in a sensory rhodopsin-transducer complex.

Authors:  Jihong Wang; Jun Sasaki; Ah-Lim Tsai; John L Spudich
Journal:  J Biol Chem       Date:  2012-04-16       Impact factor: 5.157

Review 3.  Electron cryotomography.

Authors:  Elitza I Tocheva; Zhuo Li; Grant J Jensen
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-05-05       Impact factor: 10.005

4.  Upward mobility and alternative lifestyles: a report from the 10th biennial meeting on Bacterial Locomotion and Signal Transduction.

Authors:  Birgit E Scharf; Phillip D Aldridge; John R Kirby; Brian R Crane
Journal:  Mol Microbiol       Date:  2009-06-01       Impact factor: 3.501

5.  Structure of the ternary complex formed by a chemotaxis receptor signaling domain, the CheA histidine kinase, and the coupling protein CheW as determined by pulsed dipolar ESR spectroscopy.

Authors:  Jaya Bhatnagar; Peter P Borbat; Abiola M Pollard; Alexandrine M Bilwes; Jack H Freed; Brian R Crane
Journal:  Biochemistry       Date:  2010-05-11       Impact factor: 3.162

6.  The chemoreceptor dimer is the unit of conformational coupling and transmembrane signaling.

Authors:  Divya N Amin; Gerald L Hazelbauer
Journal:  J Bacteriol       Date:  2010-01-08       Impact factor: 3.490

7.  Universal architecture of bacterial chemoreceptor arrays.

Authors:  Ariane Briegel; Davi R Ortega; Elitza I Tocheva; Kristin Wuichet; Zhuo Li; Songye Chen; Axel Müller; Cristina V Iancu; Gavin E Murphy; Megan J Dobro; Igor B Zhulin; Grant J Jensen
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-23       Impact factor: 11.205

Review 8.  Information processing in bacteria: memory, computation, and statistical physics: a key issues review.

Authors:  Ganhui Lan; Yuhai Tu
Journal:  Rep Prog Phys       Date:  2016-04-08

Review 9.  Quantitative modeling of bacterial chemotaxis: signal amplification and accurate adaptation.

Authors:  Yuhai Tu
Journal:  Annu Rev Biophys       Date:  2013-02-28       Impact factor: 12.981

10.  Kinase-active signaling complexes of bacterial chemoreceptors do not contain proposed receptor-receptor contacts observed in crystal structures.

Authors:  Daniel J Fowler; Robert M Weis; Lynmarie K Thompson
Journal:  Biochemistry       Date:  2010-02-23       Impact factor: 3.162

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