Literature DB >> 19116171

3D imaging of mammalian cells with ion-abrasion scanning electron microscopy.

Jurgen A W Heymann1, Dan Shi, Sang Kim, Donald Bliss, Jacqueline L S Milne, Sriram Subramaniam.   

Abstract

Understanding the hierarchical organization of molecules and organelles within the interior of large eukaryotic cells is a challenge of fundamental interest in cell biology. We are using ion-abrasion scanning electron microscopy (IA-SEM) to visualize this hierarchical organization in an approach that combines focused ion-beam milling with scanning electron microscopy. Here, we extend our previous studies on imaging yeast cells to image subcellular architecture in human melanoma cells and melanocytes at resolutions as high as approximately 6 and approximately 20 nm in the directions parallel and perpendicular, respectively, to the direction of ion-beam milling. The 3D images demonstrate the striking spatial relationships between specific organelles such as mitochondria and membranes of the endoplasmic reticulum, and the distribution of unique cellular components such as melanosomes. We also show that 10nm-sized gold particles and quantum dot particles with 7 nm-sized cores can be detected in single cross-sectional images. IA-SEM is thus a useful tool for imaging large mammalian cells in their entirety at resolutions in the nanometer range.

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Year:  2008        PMID: 19116171      PMCID: PMC4804765          DOI: 10.1016/j.jsb.2008.11.005

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  25 in total

Review 1.  Bridging the imaging gap: visualizing subcellular architecture with electron tomography.

Authors:  Sriram Subramaniam
Journal:  Curr Opin Microbiol       Date:  2005-06       Impact factor: 7.934

Review 2.  The quest for the mechanism of melanin transfer.

Authors:  Karolien Van Den Bossche; Jean-Marie Naeyaert; Jo Lambert
Journal:  Traffic       Date:  2006-07       Impact factor: 6.215

3.  Focused-ion-beam thinning of frozen-hydrated biological specimens for cryo-electron microscopy.

Authors:  Michael Marko; Chyongere Hsieh; Richard Schalek; Joachim Frank; Carmen Mannella
Journal:  Nat Methods       Date:  2007-02-04       Impact factor: 28.547

4.  Sorting of Pmel17 to melanosomes through the plasma membrane by AP1 and AP2: evidence for the polarized nature of melanocytes.

Authors:  Julio C Valencia; Hidenori Watabe; An Chi; Francois Rouzaud; Kevin G Chen; Wilfred D Vieira; Kaoruko Takahashi; Yuji Yamaguchi; Werner Berens; Kunio Nagashima; Jeffrey Shabanowitz; Donald F Hunt; Ettore Appella; Vincent J Hearing
Journal:  J Cell Sci       Date:  2006-02-21       Impact factor: 5.285

5.  Serial section scanning electron microscopy of adult brain tissue using focused ion beam milling.

Authors:  Graham Knott; Herschel Marchman; David Wall; Ben Lich
Journal:  J Neurosci       Date:  2008-03-19       Impact factor: 6.167

6.  Isolation and characterization of rough endoplasmic reticulum associated with mitochondria from normal rat liver.

Authors:  P J Meier; M A Spycher; U A Meyer
Journal:  Biochim Biophys Acta       Date:  1981-08-20

7.  A model for melanosome biogenesis based on the purification and analysis of early melanosomes.

Authors:  T Kushimoto; V Basrur; J Valencia; J Matsunaga; W D Vieira; V J Ferrans; J Muller; E Appella; V J Hearing
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-28       Impact factor: 11.205

8.  X-ray tomography of Schizosaccharomyces pombe.

Authors:  Weiwei Gu; Laurence D Etkin; Mark A Le Gros; Carolyn A Larabell
Journal:  Differentiation       Date:  2007-04-25       Impact factor: 3.880

9.  Direct visualization of Escherichia coli chemotaxis receptor arrays using cryo-electron microscopy.

Authors:  Peijun Zhang; Cezar M Khursigara; Lisa M Hartnell; Sriram Subramaniam
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-26       Impact factor: 11.205

10.  Serial block-face scanning electron microscopy to reconstruct three-dimensional tissue nanostructure.

Authors:  Winfried Denk; Heinz Horstmann
Journal:  PLoS Biol       Date:  2004-10-19       Impact factor: 8.029

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  36 in total

1.  X-ray microscopy as an approach to increasing accuracy and efficiency of serial block-face imaging for correlated light and electron microscopy of biological specimens.

Authors:  Eric A Bushong; Donald D Johnson; Keun-Young Kim; Masako Terada; Megumi Hatori; Steven T Peltier; Satchidananda Panda; Arno Merkle; Mark H Ellisman
Journal:  Microsc Microanal       Date:  2014-11-13       Impact factor: 4.127

Review 2.  Advances in high-resolution imaging--techniques for three-dimensional imaging of cellular structures.

Authors:  Diane S Lidke; Keith A Lidke
Journal:  J Cell Sci       Date:  2012-06-08       Impact factor: 5.285

3.  3D visualization of HIV transfer at the virological synapse between dendritic cells and T cells.

Authors:  Richard L Felts; Kedar Narayan; Jacob D Estes; Dan Shi; Charles M Trubey; Jing Fu; Lisa M Hartnell; Gordon T Ruthel; Douglas K Schneider; Kunio Nagashima; Julian W Bess; Sina Bavari; Bradley C Lowekamp; Donald Bliss; Jeffrey D Lifson; Sriram Subramaniam
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-12       Impact factor: 11.205

4.  Focused ion beam (FIB)/scanning electron microscopy (SEM) in tissue structural research.

Authors:  Vladka Leser; Marziale Milani; Francesco Tatti; Ziva Pipan Tkalec; Jasna Strus; Damjana Drobne
Journal:  Protoplasma       Date:  2010-02-19       Impact factor: 3.356

5.  Comparison of 3D cellular imaging techniques based on scanned electron probes: Serial block face SEM vs. Axial bright-field STEM tomography.

Authors:  E L McBride; A Rao; G Zhang; J D Hoyne; G N Calco; B C Kuo; Q He; A A Prince; I D Pokrovskaya; B Storrie; A A Sousa; M A Aronova; R D Leapman
Journal:  J Struct Biol       Date:  2018-02-01       Impact factor: 2.867

Review 6.  The origins and evolution of freeze-etch electron microscopy.

Authors:  John E Heuser
Journal:  J Electron Microsc (Tokyo)       Date:  2011

7.  HIV-1 activates Cdc42 and induces membrane extensions in immature dendritic cells to facilitate cell-to-cell virus propagation.

Authors:  Damjan S Nikolic; Martin Lehmann; Richard Felts; Eduardo Garcia; Fabien P Blanchet; Sriram Subramaniam; Vincent Piguet
Journal:  Blood       Date:  2011-05-11       Impact factor: 22.113

8.  A Unified Picture of Cantilever Frequency-Shift Measurements of Magnetic Resonance.

Authors:  Sanggap Lee; Eric W Moore; John A Marohn
Journal:  Phys Rev B Condens Matter Mater Phys       Date:  2012-04-15

9.  Fusion of the endoplasmic reticulum and mitochondrial outer membrane in rats brown adipose tissue: activation of thermogenesis by Ca2+.

Authors:  Leopoldo de Meis; Luisa A Ketzer; Rodrigo Madeiro da Costa; Ivone Rosa de Andrade; Marlene Benchimol
Journal:  PLoS One       Date:  2010-03-02       Impact factor: 3.240

10.  Ion-abrasion scanning electron microscopy reveals surface-connected tubular conduits in HIV-infected macrophages.

Authors:  Adam E Bennett; Kedar Narayan; Dan Shi; Lisa M Hartnell; Karine Gousset; Haifeng He; Bradley C Lowekamp; Terry S Yoo; Donald Bliss; Eric O Freed; Sriram Subramaniam
Journal:  PLoS Pathog       Date:  2009-09-25       Impact factor: 6.823

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