Literature DB >> 19666485

Poly(ADP-ribosyl)ation directs recruitment and activation of an ATP-dependent chromatin remodeler.

Aaron J Gottschalk1, Gyula Timinszky, Stephanie E Kong, Jingji Jin, Yong Cai, Selene K Swanson, Michael P Washburn, Laurence Florens, Andreas G Ladurner, Joan W Conaway, Ronald C Conaway.   

Abstract

Posttranslational modifications play a key role in recruiting chromatin remodeling and modifying enzymes to specific regions of chromosomes to modulate chromatin structure. Alc1 (amplified in liver cancer 1), a member of the SNF2 ATPase superfamily with a carboxy-terminal macrodomain, is encoded by an oncogene implicated in the pathogenesis of hepatocellular carcinoma. Here we show that Alc1 interacts transiently with chromatin-associated proteins, including histones and the poly(ADP-ribose) polymerase Parp1. Alc1 ATPase and chromatin remodeling activities are strongly activated by Parp1 and its substrate NAD and require an intact macrodomain capable of binding poly(ADP-ribose). Alc1 is rapidly recruited to nucleosomes in vitro and to chromatin in cells when Parp1 catalyzes PAR synthesis. We propose that poly(ADP-ribosyl)ation of chromatin-associated Parp1 serves as a mechanism for targeting a SNF2 family remodeler to chromatin.

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Year:  2009        PMID: 19666485      PMCID: PMC2722505          DOI: 10.1073/pnas.0906920106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  NAD+-dependent modulation of chromatin structure and transcription by nucleosome binding properties of PARP-1.

Authors:  Mi Young Kim; Steven Mauro; Nicolas Gévry; John T Lis; W Lee Kraus
Journal:  Cell       Date:  2004-12-17       Impact factor: 41.582

2.  Purification and assay of the human INO80 and SRCAP chromatin remodeling complexes.

Authors:  Yong Cai; Jingji Jin; Aaron J Gottschalk; Tingting Yao; Joan W Conaway; Ronald C Conaway
Journal:  Methods       Date:  2006-12       Impact factor: 3.608

3.  Poly(ADP-ribose) polymerase-1 activation during DNA damage and repair.

Authors:  Françoise Dantzer; Jean-Christophe Amé; Valérie Schreiber; Jun Nakamura; Josiane Ménissier-de Murcia; Gilbert de Murcia
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

4.  A pyramid approach to subpixel registration based on intensity.

Authors:  P Thévenaz; U E Ruttimann; M Unser
Journal:  IEEE Trans Image Process       Date:  1998       Impact factor: 10.856

Review 5.  Poly(ADP-ribosyl)ation by PARP-1: 'PAR-laying' NAD+ into a nuclear signal.

Authors:  Mi Young Kim; Tong Zhang; W Lee Kraus
Journal:  Genes Dev       Date:  2005-09-01       Impact factor: 11.361

6.  DNA-independent PARP-1 activation by phosphorylated ERK2 increases Elk1 activity: a link to histone acetylation.

Authors:  Malka Cohen-Armon; Leonid Visochek; Dana Rozensal; Adi Kalal; Ilona Geistrikh; Rodika Klein; Sarit Bendetz-Nezer; Zhong Yao; Rony Seger
Journal:  Mol Cell       Date:  2007-01-26       Impact factor: 17.970

7.  Regulation of poly(ADP-ribose) polymerase-1 by DNA structure-specific binding.

Authors:  Irina Lonskaya; Vladimir N Potaman; Luda S Shlyakhtenko; Elena A Oussatcheva; Yuri L Lyubchenko; Viatcheslav A Soldatenkov
Journal:  J Biol Chem       Date:  2005-02-28       Impact factor: 5.157

8.  Activity assays for poly-ADP ribose polymerase.

Authors:  Eva Kirsten; Ernest Kun; Jerome Mendeleyev; Charles P Ordahl
Journal:  Methods Mol Biol       Date:  2004

Review 9.  Evolution of the SNF2 family of proteins: subfamilies with distinct sequences and functions.

Authors:  J A Eisen; K S Sweder; P C Hanawalt
Journal:  Nucleic Acids Res       Date:  1995-07-25       Impact factor: 16.971

10.  Two related superfamilies of putative helicases involved in replication, recombination, repair and expression of DNA and RNA genomes.

Authors:  A E Gorbalenya; E V Koonin; A P Donchenko; V M Blinov
Journal:  Nucleic Acids Res       Date:  1989-06-26       Impact factor: 16.971

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  191 in total

Review 1.  CHD chromatin remodelers and the transcription cycle.

Authors:  Magdalena Murawska; Alexander Brehm
Journal:  Transcription       Date:  2011-11-01

2.  A new non-catalytic role for ubiquitin ligase RNF8 in unfolding higher-order chromatin structure.

Authors:  Martijn S Luijsterburg; Klara Acs; Leena Ackermann; Wouter W Wiegant; Simon Bekker-Jensen; Dorthe H Larsen; Kum Kum Khanna; Haico van Attikum; Niels Mailand; Nico P Dantuma
Journal:  EMBO J       Date:  2012-04-24       Impact factor: 11.598

Review 3.  More than just a focus: The chromatin response to DNA damage and its role in genome integrity maintenance.

Authors:  Jiri Lukas; Claudia Lukas; Jiri Bartek
Journal:  Nat Cell Biol       Date:  2011-10-03       Impact factor: 28.824

4.  Femtosecond near-infrared laser microirradiation reveals a crucial role for PARP signaling on factor assemblies at DNA damage sites.

Authors:  Gladys Mae Saquilabon Cruz; Xiangduo Kong; Bárbara Alcaraz Silva; Nima Khatibzadeh; Ryan Thai; Michael W Berns; Kyoko Yokomori
Journal:  Nucleic Acids Res       Date:  2015-09-30       Impact factor: 16.971

Review 5.  Spatiotemporal regulation of posttranslational modifications in the DNA damage response.

Authors:  Nico P Dantuma; Haico van Attikum
Journal:  EMBO J       Date:  2015-12-01       Impact factor: 11.598

6.  Double-stranded DNA binding domain of poly(ADP-ribose) polymerase-1 and molecular insight into the regulation of its activity.

Authors:  Orlando Huambachano; Fatima Herrera; Ann Rancourt; Masahiko S Satoh
Journal:  J Biol Chem       Date:  2010-12-23       Impact factor: 5.157

7.  CHD1L is a novel independent prognostic factor for gastric cancer.

Authors:  Z Su; J Zhao; G Xian; W Geng; Z Rong; Y Wu; C Qin
Journal:  Clin Transl Oncol       Date:  2013-11-21       Impact factor: 3.405

8.  Poly(ADP-ribose) contributes to an association between poly(ADP-ribose) polymerase-1 and xeroderma pigmentosum complementation group A in nucleotide excision repair.

Authors:  Brenee S King; Karen L Cooper; Ke Jian Liu; Laurie G Hudson
Journal:  J Biol Chem       Date:  2012-10-04       Impact factor: 5.157

9.  The histone variant macroH2A1.1 is recruited to DSBs through a mechanism involving PARP1.

Authors:  Chang Xu; Ye Xu; Ozge Gursoy-Yuzugullu; Brendan D Price
Journal:  FEBS Lett       Date:  2012-09-29       Impact factor: 4.124

Review 10.  Chromatin remodeling at DNA double-strand breaks.

Authors:  Brendan D Price; Alan D D'Andrea
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

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