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Literature DB >> 17101442

Purification and assay of the human INO80 and SRCAP chromatin remodeling complexes.

Yong Cai¹, Jingji Jin, Aaron J Gottschalk, Tingting Yao, Joan W Conaway, Ronald C Conaway.

Abstract

Chromatin modifying and remodeling enzymes play critical roles in many aspects of chromosome biology including transcription, replication, recombination, and repair. Our laboratory recently identified and characterized two multisubunit human chromatin remodeling enzymes designated the INO80 and SRCAP complexes. Mechanistic studies revealed that the human INO80 complex catalyzes nucleosome sliding and the SRCAP complex catalyzes ATP-dependent exchange of histone H2A/H2B dimers containing the histone variant H2A.Z into nucleosomes. Here we describe methods for purification and assay of the INO80 and SRCAP chromatin remodeling complexes.

Entities: Chemical Gene Species

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Year: 2006 PMID： 17101442 PMCID： PMC3092633 DOI： 10.1016/j.ymeth.2006.06.023

Source DB: PubMed Journal: Methods ISSN： 1046-2023 Impact factor: 3.608

17 in total

1. Sequence and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites.

Authors: J D Anderson; J Widom
Journal: J Mol Biol Date: 2000-03-03 Impact factor: 5.469

Review 2. ATP-dependent nucleosome remodeling.

Authors: Peter B Becker; Wolfram Hörz
Journal: Annu Rev Biochem Date: 2001-11-09 Impact factor: 23.643

3. Purification of a human SRCAP complex that remodels chromatin by incorporating the histone variant H2A.Z into nucleosomes.

Authors: Donald D Ruhl; Jingji Jin; Yong Cai; Selene Swanson; Laurence Florens; Michael P Washburn; Ronald C Conaway; Joan Weliky Conaway; John C Chrivia
Journal: Biochemistry Date: 2006-05-02 Impact factor: 3.162

4. Regulation of cAMP-responsive element-binding protein-mediated transcription by the SNF2/SWI-related protein, SRCAP.

Authors: M A Monroy; D D Ruhl; X Xu; D K Granner; P Yaciuk; J C Chrivia
Journal: J Biol Chem Date: 2001-08-24 Impact factor: 5.157

5. A chromatin remodelling complex involved in transcription and DNA processing.

Authors: X Shen; G Mizuguchi; A Hamiche; C Wu
Journal: Nature Date: 2000-08-03 Impact factor: 49.962

6. Regulation of chromosome stability by the histone H2A variant Htz1, the Swr1 chromatin remodeling complex, and the histone acetyltransferase NuA4.

Authors: Nevan J Krogan; Kristin Baetz; Michael-Christopher Keogh; Nira Datta; Chika Sawa; Trevor C Y Kwok; Natalie J Thompson; Michael G Davey; Jeff Pootoolal; Timothy R Hughes; Andrew Emili; Stephen Buratowski; Philip Hieter; Jack F Greenblatt
Journal: Proc Natl Acad Sci U S A Date: 2004-09-07 Impact factor: 11.205

7. SNF2-related CBP activator protein (SRCAP) functions as a coactivator of steroid receptor-mediated transcription through synergistic interactions with CARM-1 and GRIP-1.

Authors: M Alexandra Monroy; Natalie M Schott; Linda Cox; J Don Chen; Mary Ruh; John C Chrivia
Journal: Mol Endocrinol Date: 2003-09-18

8. Involvement of actin-related proteins in ATP-dependent chromatin remodeling.

Authors: Xuetong Shen; Ryan Ranallo; Eugene Choi; Carl Wu
Journal: Mol Cell Date: 2003-07 Impact factor: 17.970

9. ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex.

Authors: Gaku Mizuguchi; Xuetong Shen; Joe Landry; Wei-Hua Wu; Subhojit Sen; Carl Wu
Journal: Science Date: 2003-11-26 Impact factor: 47.728

10. A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin.

Authors: Michael S Kobor; Shivkumar Venkatasubrahmanyam; Marc D Meneghini; Jennifer W Gin; Jennifer L Jennings; Andrew J Link; Hiten D Madhani; Jasper Rine
Journal: PLoS Biol Date: 2004-03-23 Impact factor: 8.029

19 in total

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Authors: Richard B Meagher; Muthugapatti K Kandasamy; Elizabeth C McKinney; Eileen Roy
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Review 2. Facilitation of base excision repair by chromatin remodeling.

Authors: John M Hinz; Wioletta Czaja
Journal: DNA Repair (Amst) Date: 2015-09-16

3. Poly(ADP-ribosyl)ation directs recruitment and activation of an ATP-dependent chromatin remodeler.

Authors: Aaron J Gottschalk; Gyula Timinszky; Stephanie E Kong; Jingji Jin; Yong Cai; Selene K Swanson; Michael P Washburn; Laurence Florens; Andreas G Ladurner; Joan W Conaway; Ronald C Conaway
Journal: Proc Natl Acad Sci U S A Date: 2009-08-06 Impact factor: 11.205

4. Subunit organization of the human INO80 chromatin remodeling complex: an evolutionarily conserved core complex catalyzes ATP-dependent nucleosome remodeling.

Authors: Lu Chen; Yong Cai; Jingji Jin; Laurence Florens; Selene K Swanson; Michael P Washburn; Joan Weliky Conaway; Ronald C Conaway
Journal: J Biol Chem Date: 2011-02-08 Impact factor: 5.157

5. HIRA complex presets transcriptional potential through coordinating depositions of the histone variants H3.3 and H2A.Z on the poised genes in mESCs.

Authors: Yang Yang; Liwei Zhang; Chaoyang Xiong; Jun Chen; Li Wang; Zengqi Wen; Juan Yu; Ping Chen; Yanhui Xu; Jingji Jin; Yong Cai; Guohong Li
Journal: Nucleic Acids Res Date: 2022-01-11 Impact factor: 16.971

6. Subunit composition and substrate specificity of a MOF-containing histone acetyltransferase distinct from the male-specific lethal (MSL) complex.

Authors: Yong Cai; Jingji Jin; Selene K Swanson; Michael D Cole; Seung Hyuk Choi; Laurence Florens; Michael P Washburn; Joan W Conaway; Ronald C Conaway
Journal: J Biol Chem Date: 2009-12-14 Impact factor: 5.157