Literature DB >> 19648037

Incorporating 1H chemical shift determination into 13C-direct detected spectroscopy of intrinsically disordered proteins in solution.

Bernie O'Hare1, Alan J Benesi, Scott A Showalter.   

Abstract

Exclusively heteronuclear (13)C-detected NMR spectroscopy of proteins in solution has seen resurgence in the past several years. For disordered or unfolded proteins, which tend to have poor (1)H-amide chemical shift dispersion, these experiments offer enhanced resolution and the possibility of complete heteronuclear resonance assignment at the cost of leaving the (1)H resonances unassigned. Here we report two novel (13)C-detected NMR experiments which incorporate a (1)H chemical shift evolution period followed by (13)C-TOCSY mixing for aliphatic (1)H resonance assignment without reliance on (1)H detection.

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Year:  2009        PMID: 19648037     DOI: 10.1016/j.jmr.2009.07.014

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  13 in total

1.  Speeding up sequence specific assignment of IDPs.

Authors:  Wolfgang Bermel; Ivano Bertini; Isabella C Felli; Leonardo Gonnelli; Wiktor Koźmiński; Alessandro Piai; Roberta Pierattelli; Jan Stanek
Journal:  J Biomol NMR       Date:  2012-06-10       Impact factor: 2.835

2.  High-dimensionality 13C direct-detected NMR experiments for the automatic assignment of intrinsically disordered proteins.

Authors:  Wolfgang Bermel; Isabella C Felli; Leonardo Gonnelli; Wiktor Koźmiński; Alessandro Piai; Roberta Pierattelli; Anna Zawadzka-Kazimierczuk
Journal:  J Biomol NMR       Date:  2013-11-08       Impact factor: 2.835

3.  15N detection harnesses the slow relaxation property of nitrogen: Delivering enhanced resolution for intrinsically disordered proteins.

Authors:  Sandeep Chhabra; Patrick Fischer; Koh Takeuchi; Abhinav Dubey; Joshua J Ziarek; Andras Boeszoermenyi; Daniel Mathieu; Wolfgang Bermel; Norman E Davey; Gerhard Wagner; Haribabu Arthanari
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-05       Impact factor: 11.205

4.  Improving the chemical shift dispersion of multidimensional NMR spectra of intrinsically disordered proteins.

Authors:  Wolfgang Bermel; Marta Bruix; Isabella C Felli; Vasantha Kumar M V; Roberta Pierattelli; Soraya Serrano
Journal:  J Biomol NMR       Date:  2013-01-12       Impact factor: 2.835

5.  Generating NMR chemical shift assignments of intrinsically disordered proteins using carbon-detected NMR methods.

Authors:  Debashish Sahu; Monique Bastidas; Scott A Showalter
Journal:  Anal Biochem       Date:  2013-12-10       Impact factor: 3.365

6.  13C APSY-NMR for sequential assignment of intrinsically disordered proteins.

Authors:  Maria Grazia Murrali; Marco Schiavina; Valerio Sainati; Wolfgang Bermel; Roberta Pierattelli; Isabella C Felli
Journal:  J Biomol NMR       Date:  2018-02-28       Impact factor: 2.835

7.  The Structural Properties in Solution of the Intrinsically Mixed Folded Protein Ataxin-3.

Authors:  Alessandro Sicorello; Geoff Kelly; Alain Oregioni; Jiří Nováček; Vladimír Sklenář; Annalisa Pastore
Journal:  Biophys J       Date:  2018-07-03       Impact factor: 4.033

8.  An Evolution-Based Approach to De Novo Protein Design.

Authors:  Jeffrey R Brender; David Shultis; Naureen Aslam Khattak; Yang Zhang
Journal:  Methods Mol Biol       Date:  2017

9.  "CON-CON" assignment strategy for highly flexible intrinsically disordered proteins.

Authors:  Alessandro Piai; Tomáš Hošek; Leonardo Gonnelli; Anna Zawadzka-Kazimierczuk; Wiktor Koźmiński; Bernhard Brutscher; Wolfgang Bermel; Roberta Pierattelli; Isabella C Felli
Journal:  J Biomol NMR       Date:  2014-10-19       Impact factor: 2.835

Review 10.  Practical aspects of NMR signal assignment in larger and challenging proteins.

Authors:  Dominique P Frueh
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-12-15       Impact factor: 9.795

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