Literature DB >> 19629595

Mosaic heterochromatin of the inactive X chromosome in vole Microtus rossiaemeridionalis.

Alexander I Shevchenko1, Sophia V Pavlova, Elena V Dementyeva, Suren M Zakian.   

Abstract

During early development in female mammals, one of the two X chromosomes recruits a variety of protein complexes that establish repressive chromatin modifications and thus becomes transcriptionally silenced. This process is termed X chromosome inactivation (XCI). Imprinted XCI of the paternal X chromosome occurs in the extraembryonic lineages of some eutherian species (e.g., rodents). In the cells of the embryo proper, the choice of the X chromosome for XCI is random. In this study we compared the distribution of some histone modifications on metaphase spreads from extraembryonic endoderm and fibroblast cell lines in vole Microtus rossiaemeridionalis, which are examples of imprinted and random XCI, respectively. The X chromosome of M. rossiaemeridionalis bears a large constitutive heterochromatic block enriched with repeated DNA, making this species a useful model for studying chromatin structure. In vole fibroblasts and the majority of extraembryonic endoderm cells, the silencing of the inactive X chromosome appears to involve two types of facultative heterochromatin. The first is defined by H3K27 trimethylation and H2A ubiquitylation and colocalizes with previously described Xist RNA banding, whereas the second is associated with H3K9 trimethylation and the heterochromatic protein HP1. The block of constitutive heterochromatin on the M. rossiaemeridionalis X chromosome has the same pattern of chromatin modifications as the second type of facultative heterochromatin. The distribution of histone modifications, HP1 protein, and Xist RNA on vole inactive X chromosome is the same during both the imprinted and the random XCI.

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Year:  2009        PMID: 19629595     DOI: 10.1007/s00335-009-9201-x

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  32 in total

1.  Epigenetic dynamics of imprinted X inactivation during early mouse development.

Authors:  Ikuhiro Okamoto; Arie P Otte; C David Allis; Danny Reinberg; Edith Heard
Journal:  Science       Date:  2003-12-11       Impact factor: 47.728

2.  Reactivation of the paternal X chromosome in early mouse embryos.

Authors:  Winifred Mak; Tatyana B Nesterova; Mariana de Napoles; Ruth Appanah; Shinya Yamanaka; Arie P Otte; Neil Brockdorff
Journal:  Science       Date:  2004-01-30       Impact factor: 47.728

3.  Polycomb group proteins Ring1A/B link ubiquitylation of histone H2A to heritable gene silencing and X inactivation.

Authors:  Mariana de Napoles; Jacqueline E Mermoud; Rika Wakao; Y Amy Tang; Mitusuhiro Endoh; Ruth Appanah; Tatyana B Nesterova; Jose Silva; Arie P Otte; Miguel Vidal; Haruhiko Koseki; Neil Brockdorff
Journal:  Dev Cell       Date:  2004-11       Impact factor: 12.270

Review 4.  Delving into the diversity of facultative heterochromatin: the epigenetics of the inactive X chromosome.

Authors:  Edith Heard
Journal:  Curr Opin Genet Dev       Date:  2005-10       Impact factor: 5.578

5.  Variation in Xi chromatin organization and correlation of the H3K27me3 chromatin territories to transcribed sequences by microarray analysis.

Authors:  Brian P Chadwick
Journal:  Chromosoma       Date:  2006-11-14       Impact factor: 4.316

6.  H3K27me3 forms BLOCs over silent genes and intergenic regions and specifies a histone banding pattern on a mouse autosomal chromosome.

Authors:  Florian M Pauler; Mathew A Sloane; Ru Huang; Kakkad Regha; Martha V Koerner; Ido Tamir; Andreas Sommer; Andras Aszodi; Thomas Jenuwein; Denise P Barlow
Journal:  Genome Res       Date:  2008-12-01       Impact factor: 9.043

7.  [Extraembryonic endoderm stem cell lines from common voles of the genus Microtus].

Authors:  A I Shevchenko; V V Demina; N A Mazurok; A I Zhelezova; Ia R Efremov; a G Shilov; A I Shevela; A V Belevantseva; V V Vlasov; S M Zakiian
Journal:  Genetika       Date:  2008-11

8.  Chromosome-wide, allele-specific analysis of the histone code on the human X chromosome.

Authors:  Cory M Valley; Lisa M Pertz; Bala S Balakumaran; Huntington F Willard
Journal:  Hum Mol Genet       Date:  2006-06-20       Impact factor: 6.150

9.  Inheritance of a pre-inactivated paternal X chromosome in early mouse embryos.

Authors:  Khanh D Huynh; Jeannie T Lee
Journal:  Nature       Date:  2003-12-07       Impact factor: 49.962

10.  Repetitive DNA sequences in the common vole: cloning, characterization and chromosome localization of two novel complex repeats MS3 and MS4 from the genome of the East European vole Microtus rossiaemeridionalis.

Authors:  E A Elisaphenko; T B Nesterova; S M Duthie; O V Ruldugina; I B Rogozin; N Brockdorff; S M Zakian
Journal:  Chromosome Res       Date:  1998-08       Impact factor: 5.239

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  13 in total

1.  Difference between random and imprinted X inactivation in common voles.

Authors:  Elena V Dementyeva; Alexander I Shevchenko; Olga V Anopriyenko; Nina A Mazurok; Eugeny A Elisaphenko; Tatyana B Nesterova; Neil Brockdorff; Suren M Zakian
Journal:  Chromosoma       Date:  2010-05-15       Impact factor: 4.316

2.  Epigenetic modifications in sex heterochromatin of vole rodents.

Authors:  I Romero-Fernández; C S Casas-Delucchi; M Cano-Linares; M Arroyo; A Sánchez; M C Cardoso; J A Marchal
Journal:  Chromosoma       Date:  2014-12-21       Impact factor: 4.316

3.  Human inactive X chromosome is compacted through a PRC2-independent SMCHD1-HBiX1 pathway.

Authors:  Ryu-Suke Nozawa; Koji Nagao; Ken-Taro Igami; Sachiko Shibata; Natsuko Shirai; Naohito Nozaki; Takashi Sado; Hiroshi Kimura; Chikashi Obuse
Journal:  Nat Struct Mol Biol       Date:  2013-03-31       Impact factor: 15.369

4.  Histone H3 trimethylation at lysine 9 marks the inactive metaphase X chromosome in the marsupial Monodelphis domestica.

Authors:  Irina S Zakharova; Alexander I Shevchenko; Alexander G Shilov; Tatyana B Nesterova; John L Vandeberg; Suren M Zakian
Journal:  Chromosoma       Date:  2010-11-26       Impact factor: 4.316

5.  Constitutive heterochromatin propagation contributes to the X chromosome inactivation.

Authors:  Alexander I Shevchenko; Nikita A Rifel; Suren M Zakian; Irina S Zakharova
Journal:  Chromosome Res       Date:  2022-08-03       Impact factor: 4.620

6.  Impact of Xist RNA on chromatin modifications and transcriptional silencing maintenance at different stages of imprinted X chromosome inactivation in vole Microtus levis.

Authors:  Alexander I Shevchenko; Elena V Grigor'eva; Sergey P Medvedev; Irina S Zakharova; Elena V Dementyeva; Eugeny A Elisaphenko; Anastasia A Malakhova; Sophia V Pavlova; Suren M Zakian
Journal:  Chromosoma       Date:  2017-11-18       Impact factor: 4.316

7.  Deletion of the XIST promoter from the human inactive X chromosome compromises polycomb heterochromatin maintenance.

Authors:  Natalia Westervelt; Andrea Yoest; Sadia Sayed; Marina Von Zimmerman; Kelly Kaps; Brian P Chadwick
Journal:  Chromosoma       Date:  2021-03-21       Impact factor: 2.919

8.  Mapping of Replication Origins in the X Inactivation Center of Vole Microtus levis Reveals Extended Replication Initiation Zone.

Authors:  Vladimir V Sherstyuk; Alexander I Shevchenko; Suren M Zakian
Journal:  PLoS One       Date:  2015-06-03       Impact factor: 3.240

9.  Dynamics of the two heterochromatin types during imprinted X chromosome inactivation in vole Microtus levis.

Authors:  Evgeniya A Vaskova; Elena V Dementyeva; Alexander I Shevchenko; Sophia V Pavlova; Elena V Grigor'eva; Antonina I Zhelezova; John L Vandeberg; Suren M Zakian
Journal:  PLoS One       Date:  2014-02-04       Impact factor: 3.240

10.  The evolutionary pathway of x chromosome inactivation in mammals.

Authors:  A I Shevchenko; I S Zakharova; S M Zakian
Journal:  Acta Naturae       Date:  2013-04       Impact factor: 1.845

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