Literature DB >> 19620971

MAQGene: software to facilitate C. elegans mutant genome sequence analysis.

Henry Bigelow, Maria Doitsidou, Sumeet Sarin, Oliver Hobert.   

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Year:  2009        PMID： 19620971      PMCID： PMC2854518          DOI： 10.1038/nmeth.f.260

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  4 in total

1.  Mapping short DNA sequencing reads and calling variants using mapping quality scores.

Authors:  Heng Li; Jue Ruan; Richard Durbin
Journal:  Genome Res       Date:  2008-08-19       Impact factor: 9.043

2.  Caenorhabditis elegans mutant allele identification by whole-genome sequencing.

Authors:  Sumeet Sarin; Snehit Prabhu; M Maggie O'Meara; Itsik Pe'er; Oliver Hobert
Journal:  Nat Methods       Date:  2008-08-01       Impact factor: 28.547

3.  Identification of EMS-induced mutations in Drosophila melanogaster by whole-genome sequencing.

Authors:  Justin P Blumenstiel; Aaron C Noll; Jennifer A Griffiths; Anoja G Perera; Kendra N Walton; William D Gilliland; R Scott Hawley; Karen Staehling-Hampton
Journal:  Genetics       Date:  2009-03-23       Impact factor: 4.562

4.  Comparing platforms for C. elegans mutant identification using high-throughput whole-genome sequencing.

Authors:  Yufeng Shen; Sumeet Sarin; Ye Liu; Oliver Hobert; Itsik Pe'er
Journal:  PLoS One       Date:  2008-12-24       Impact factor: 3.240
  4 in total
  64 in total

1.  A novel role for the zinc-finger transcription factor EGL-46 in the differentiation of gas-sensing neurons in Caenorhabditis elegans.

Authors:  Teresa Rojo Romanos; Jakob Gramstrup Petersen; Alba Redo Riveiro; Roger Pocock
Journal:  Genetics       Date:  2014-11-12       Impact factor: 4.562

2.  A strategy for direct mapping and identification of mutations by whole-genome sequencing.

Authors:  Steven Zuryn; Stéphanie Le Gras; Karine Jamet; Sophie Jarriault
Journal:  Genetics       Date:  2010-07-06       Impact factor: 4.562

3.  NHX-5, an Endosomal Na+/H+ Exchanger, Is Associated with Metformin Action.

Authors:  Jeongho Kim; Hye-Yeon Lee; Jheesoo Ahn; Moonjung Hyun; Inhwan Lee; Kyung-Jin Min; Young-Jai You
Journal:  J Biol Chem       Date:  2016-07-19       Impact factor: 5.157

4.  Membrane fluidity is regulated by the C. elegans transmembrane protein FLD-1 and its human homologs TLCD1/2.

Authors:  Mario Ruiz; Rakesh Bodhicharla; Emma Svensk; Ranjan Devkota; Kiran Busayavalasa; Henrik Palmgren; Marcus Ståhlman; Jan Boren; Marc Pilon
Journal:  Elife       Date:  2018-12-04       Impact factor: 8.140

5.  A combinatorial regulatory signature controls terminal differentiation of the dopaminergic nervous system in C. elegans.

Authors:  Maria Doitsidou; Nuria Flames; Irini Topalidou; Namiko Abe; Terry Felton; Laura Remesal; Tatiana Popovitchenko; Richard Mann; Martin Chalfie; Oliver Hobert
Journal:  Genes Dev       Date:  2013-06-15       Impact factor: 11.361

Review 6.  From genes to function: the C. elegans genetic toolbox.

Authors:  Thomas Boulin; Oliver Hobert
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2011-11-28       Impact factor: 5.814

7.  The impact of whole genome sequencing on model system genetics: get ready for the ride.

Authors:  Oliver Hobert
Journal:  Genetics       Date:  2010-02       Impact factor: 4.562

8.  The SWI/SNF chromatin remodeling complex selectively affects multiple aspects of serotonergic neuron differentiation.

Authors:  Peter Weinberg; Nuria Flames; Hitoshi Sawa; Gian Garriga; Oliver Hobert
Journal:  Genetics       Date:  2013-03-02       Impact factor: 4.562

9.  The mitochondrial unfolded protein response activator ATFS-1 protects cells from inhibition of the mevalonate pathway.

Authors:  Manish Rauthan; Parmida Ranji; Nataly Aguilera Pradenas; Christophe Pitot; Marc Pilon
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-25       Impact factor: 11.205

10.  C. elegans mutant identification with a one-step whole-genome-sequencing and SNP mapping strategy.

Authors:  Maria Doitsidou; Richard J Poole; Sumeet Sarin; Henry Bigelow; Oliver Hobert
Journal:  PLoS One       Date:  2010-11-08       Impact factor: 3.240
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