Literature DB >> 19603486

Elucidating the exact role of engineered CRABPII residues for the formation of a retinal protonated Schiff base.

Chrysoula Vasileiou1, Wenjing Wang, Xiaofei Jia, Kin Sing Stephen Lee, Camille T Watson, James H Geiger, Babak Borhan.   

Abstract

Cellular Retinoic Acid Binding Protein II (CRABPII) has been reengineered to specifically bind and react with all-trans-retinal to form a protonated Schiff base. Each step of this process has been dissected and four residues (Lys132, Tyr134, Arg111, and Glu121) within the CRABPII binding site have been identified as crucial for imine formation and/or protonation. The precise role of each residue has been examined through site directed mutagenesis and crystallographic studies. The crystal structure of the R132K:L121E-CRABPII (PDB-3I17) double mutant suggests a direct interaction between engineered Glu121 and the native Arg111, which is critical for both Schiff base formation and protonation. 2009 Wiley-Liss, Inc.

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Year:  2009        PMID: 19603486      PMCID: PMC4306427          DOI: 10.1002/prot.22495

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  41 in total

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Review 4.  Interactions of retinoid binding proteins and enzymes in retinoid metabolism.

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Review 5.  A twisted base? The role of arginine in enzyme-catalyzed proton abstractions.

Authors:  Yollete V Guillén Schlippe; Lizbeth Hedstrom
Journal:  Arch Biochem Biophys       Date:  2005-01-01       Impact factor: 4.013

6.  Crystal structures of cellular retinoic acid binding proteins I and II in complex with all-trans-retinoic acid and a synthetic retinoid.

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Journal:  Structure       Date:  1994-12-15       Impact factor: 5.006

7.  Nuclear detection of cellular retinoic acid binding proteins I and II with new antibodies.

Authors:  M P Gaub; Y Lutz; N B Ghyselinck; I Scheuer; V Pfister; P Chambon; C Rochette-Egly
Journal:  J Histochem Cytochem       Date:  1998-10       Impact factor: 2.479

Review 8.  Structure and energetics of the hydrogen-bonded backbone in protein folding.

Authors:  D Wayne Bolen; George D Rose
Journal:  Annu Rev Biochem       Date:  2008       Impact factor: 23.643

9.  Dissection of the critical binding determinants of cellular retinoic acid binding protein II by mutagenesis and fluorescence binding assay.

Authors:  Chrysoula Vasileiou; Kin Sing Stephen Lee; Rachael M Crist; Soheila Vaezeslami; Sarah M Goins; James H Geiger; Babak Borhan
Journal:  Proteins       Date:  2009-08-01

10.  Retinoic acid receptors and cellular retinoid binding proteins. I. A systematic study of their differential pattern of transcription during mouse organogenesis.

Authors:  P Dollé; E Ruberte; P Leroy; G Morriss-Kay; P Chambon
Journal:  Development       Date:  1990-12       Impact factor: 6.868

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  7 in total

1.  Engineering of a Red Fluorogenic Protein/Merocyanine Complex for Live-Cell Imaging.

Authors:  Elizabeth M Santos; Tetyana Berbasova; Wenjing Wang; Rahele Esmatpour Salmani; Wei Sheng; Chrysoula Vasileiou; James H Geiger; Babak Borhan
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2.  Light-Activated Reversible Imine Isomerization: Towards a Photochromic Protein Switch.

Authors:  Tetyana Berbasova; Elizabeth M Santos; Meisam Nosrati; Chrysoula Vasileiou; James H Geiger; Babak Borhan
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Review 3.  The photochemical determinants of color vision: revealing how opsins tune their chromophore's absorption wavelength.

Authors:  Wenjing Wang; James H Geiger; Babak Borhan
Journal:  Bioessays       Date:  2013-10-24       Impact factor: 4.345

4.  Domain-Swapped Dimers of Intracellular Lipid-Binding Proteins: Evidence for Ordered Folding Intermediates.

Authors:  Zahra Assar; Zahra Nossoni; Wenjing Wang; Elizabeth M Santos; Kevin Kramer; Colin McCornack; Chrysoula Vasileiou; Babak Borhan; James H Geiger
Journal:  Structure       Date:  2016-08-11       Impact factor: 5.006

5.  Arylfluorosulfates Inactivate Intracellular Lipid Binding Protein(s) through Chemoselective SuFEx Reaction with a Binding Site Tyr Residue.

Authors:  Wentao Chen; Jiajia Dong; Lars Plate; David E Mortenson; Gabriel J Brighty; Suhua Li; Yu Liu; Andrea Galmozzi; Peter S Lee; Jonathan J Hulce; Benjamin F Cravatt; Enrique Saez; Evan T Powers; Ian A Wilson; K Barry Sharpless; Jeffery W Kelly
Journal:  J Am Chem Soc       Date:  2016-06-02       Impact factor: 15.419

6.  Free-Energy-Based Protein Design: Re-Engineering Cellular Retinoic Acid Binding Protein II Assisted by the Moveable-Type Approach.

Authors:  Haizhen A Zhong; Elizabeth M Santos; Chrysoula Vasileiou; Zheng Zheng; James H Geiger; Babak Borhan; Kenneth M Merz
Journal:  J Am Chem Soc       Date:  2018-02-28       Impact factor: 15.419

7.  "Turn-on" protein fluorescence: in situ formation of cyanine dyes.

Authors:  Ipek Yapici; Kin Sing Stephen Lee; Tetyana Berbasova; Meisam Nosrati; Xiaofei Jia; Chrysoula Vasileiou; Wenjing Wang; Elizabeth M Santos; James H Geiger; Babak Borhan
Journal:  J Am Chem Soc       Date:  2015-01-14       Impact factor: 15.419

  7 in total

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