Literature DB >> 19590751

Using Microfluidics to Decouple Nucleation and Growth of Protein Crystals.

Jung-Uk Shim1, Galder Cristobal, Darren R Link, Todd Thorsen, Seth Fraden.   

Abstract

A high throughput, low volume microfluidic device has been designed to decouple the physical processes of protein crystal nucleation and growth. This device, called the Phase Chip, is constructed out of poly(dimethylsiloxane) (PDMS) elastomer. One of the Phase Chip's innovations is to exploit surface tension forces to guide each drop to a storage chamber. We demonstrate that nanoliter water-in-oil drops of protein solutions can be rapidly stored in individual wells thereby allowing the screening of 1000 conditions while consuming a total of only 10 mug protein on a 20 cm(2) chip. Another significant advance over current microfluidic devices is that each well is in contact with a reservoir via a dialysis membrane through which only water and other low molecular weight organic solvents can pass, but not salt, polymer, or protein. This enables the concentration of all solutes in a solution to be reversibly, rapidly, and precisely varied in contrast to current methods, such as the free interface diffusion or sitting drop methods, which are irreversible. The Phase Chip operates by first optimizing conditions for nucleation by using dialysis to supersaturate the protein solution, which leads to nucleation of many small crystals. Next, conditions are optimized for crystal growth by using dialysis to reduce the protein and precipitant concentrations, which leads small crystals to dissolve while simultaneously causing only the largest ones to grow, ultimately resulting in the transformation of many small, unusable crystals into a few large ones.

Entities:  

Year:  2007        PMID: 19590751      PMCID: PMC2707080          DOI: 10.1021/cg700688f

Source DB:  PubMed          Journal:  Cryst Growth Des        ISSN: 1528-7483            Impact factor:   4.076


  9 in total

Review 1.  Seeds to crystals.

Authors:  Terese Bergfors
Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

2.  A robust and scalable microfluidic metering method that allows protein crystal growth by free interface diffusion.

Authors:  Carl L Hansen; Emmanuel Skordalakes; James M Berger; Stephen R Quake
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-16       Impact factor: 11.205

3.  Systematic investigation of protein phase behavior with a microfluidic formulator.

Authors:  Carl L Hansen; Morten O A Sommer; Stephen R Quake
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-27       Impact factor: 11.205

Review 4.  Turning protein crystallisation from an art into a science.

Authors:  Naomi E Chayen
Journal:  Curr Opin Struct Biol       Date:  2004-10       Impact factor: 6.809

Review 5.  Methods for separating nucleation and growth in protein crystallisation.

Authors:  Naomi E Chayen
Journal:  Prog Biophys Mol Biol       Date:  2005-07       Impact factor: 3.667

6.  Screening of protein crystallization conditions on a microfluidic chip using nanoliter-size droplets.

Authors:  Bo Zheng; L Spencer Roach; Rustem F Ismagilov
Journal:  J Am Chem Soc       Date:  2003-09-17       Impact factor: 15.419

Review 7.  Using nanoliter plugs in microfluidics to facilitate and understand protein crystallization.

Authors:  Bo Zheng; Cory J Gerdts; Rustem F Ismagilov
Journal:  Curr Opin Struct Biol       Date:  2005-10       Impact factor: 6.809

8.  Solid-liquid phase boundaries of lens protein solutions.

Authors:  C R Berland; G M Thurston; M Kondo; M L Broide; J Pande; O Ogun; G B Benedek
Journal:  Proc Natl Acad Sci U S A       Date:  1992-02-15       Impact factor: 11.205

9.  Permeation-driven flow in poly(dimethylsiloxane) microfluidic devices.

Authors:  Greg C Randall; Patrick S Doyle
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-25       Impact factor: 11.205

  9 in total
  20 in total

1.  Feasibility of one-shot-per-crystal structure determination using Laue diffraction.

Authors:  Sterling Cornaby; Doletha M E Szebenyi; Detlef-M Smilgies; David J Schuller; Richard Gillilan; Quan Hao; Donald H Bilderback
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

2.  Development of high-performance X-ray transparent crystallization plates for in situ protein crystal screening and analysis.

Authors:  Ahmed S M Soliman; Matthew Warkentin; Benjamin Apker; Robert E Thorne
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-06-11

3.  Behavior of a train of droplets in a fluidic network with hydrodynamic traps.

Authors:  Swastika S Bithi; Siva A Vanapalli
Journal:  Biomicrofluidics       Date:  2010-12-06       Impact factor: 2.800

Review 4.  Optimization of crystallization conditions for biological macromolecules.

Authors:  Alexander McPherson; Bob Cudney
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-10-31       Impact factor: 1.056

5.  Approaches to automated protein crystal harvesting.

Authors:  Marc C Deller; Bernhard Rupp
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-01-28       Impact factor: 1.056

6.  Parallel temperature-dependent microrheological measurements in a microfluidic chip.

Authors:  Lilian Lam Josephson; William J Galush; Eric M Furst
Journal:  Biomicrofluidics       Date:  2016-06-14       Impact factor: 2.800

7.  Minimal physical requirements for crystal growth self-poisoning.

Authors:  Stephen Whitelam; Yuba Raj Dahal; Jeremy D Schmit
Journal:  J Chem Phys       Date:  2016-02-14       Impact factor: 3.488

8.  Determination of the phase diagram for soluble and membrane proteins.

Authors:  Sameer Talreja; Sarah L Perry; Sudipto Guha; Venkateswarlu Bhamidi; Charles F Zukoski; Paul J A Kenis
Journal:  J Phys Chem B       Date:  2010-04-08       Impact factor: 2.991

9.  The effect of protein-precipitant interfaces and applied shear on the nucleation and growth of lysozyme crystals.

Authors:  Nuno M Reis; Dimitri Y Chirgadze; Tom L Blundell; Malcolm R Mackley
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-10-22

10.  Nucleation and solidification in static arrays of monodisperse drops.

Authors:  Jon F Edd; Katherine J Humphry; Daniel Irimia; David A Weitz; Mehmet Toner
Journal:  Lab Chip       Date:  2009-04-03       Impact factor: 6.799

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