Literature DB >> 16154351

Using nanoliter plugs in microfluidics to facilitate and understand protein crystallization.

Bo Zheng1, Cory J Gerdts, Rustem F Ismagilov.   

Abstract

Protein crystallization is important for determining protein structures by X-ray diffraction. Nanoliter-sized plugs--aqueous droplets surrounded by a fluorinated carrier fluid--have been applied to the screening of protein crystallization conditions. Preformed arrays of plugs in capillary cartridges enable sparse matrix screening. Crystals grown in plugs inside a microcapillary may be analyzed by in situ X-ray diffraction. Screening using plugs, which are easily formed in PDMS microfluidic channels, is simple and economical, and minimizes consumption of the protein. This approach also has the potential to improve our understanding of the fundamentals of protein crystallization, such as the effect of mixing on the nucleation of crystals.

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Year:  2005        PMID: 16154351      PMCID: PMC1764865          DOI: 10.1016/j.sbi.2005.08.009

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  49 in total

1.  Dynamic pattern formation in a vesicle-generating microfluidic device.

Authors:  T Thorsen; R W Roberts; F H Arnold; S R Quake
Journal:  Phys Rev Lett       Date:  2001-04-30       Impact factor: 9.161

Review 2.  Time-resolved biochemical crystallography: a mechanistic perspective.

Authors:  K Moffat
Journal:  Chem Rev       Date:  2001-06       Impact factor: 60.622

Review 3.  The promise of macromolecular crystallization in microfluidic chips.

Authors:  Mark van der Woerd; Darren Ferree; Marc Pusey
Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

4.  Multi-step synthesis of nanoparticles performed on millisecond time scale in a microfluidic droplet-based system.

Authors:  Ilya Shestopalov; Joshua D Tice; Rustem F Ismagilov
Journal:  Lab Chip       Date:  2004-07-05       Impact factor: 6.799

5.  Microfluidic synthesis of colloidal silica.

Authors:  Saif A Khan; Axel Günther; Martin A Schmidt; Klavs F Jensen
Journal:  Langmuir       Date:  2004-09-28       Impact factor: 3.882

6.  Geometrically mediated breakup of drops in microfluidic devices.

Authors:  D R Link; S L Anna; D A Weitz; H A Stone
Journal:  Phys Rev Lett       Date:  2004-02-06       Impact factor: 9.161

7.  Solvent-resistant photocurable liquid fluoropolymers for microfluidic device fabrication [corrected].

Authors:  Jason P Rolland; R Michael Van Dam; Derek A Schorzman; Stephen R Quake; Joseph M DeSimone
Journal:  J Am Chem Soc       Date:  2004-03-03       Impact factor: 15.419

Review 8.  Life in the fast lane for protein crystallization and X-ray crystallography.

Authors:  Marc L Pusey; Zhi-Jie Liu; Wolfram Tempel; Jeremy Praissman; Dawei Lin; Bi-Cheng Wang; José A Gavira; Joseph D Ng
Journal:  Prog Biophys Mol Biol       Date:  2005-07       Impact factor: 3.667

9.  A metastable prerequisite for the growth of lumazine synthase crystals.

Authors:  Olga Gliko; Nikolaus Neumaier; Weichun Pan; Ilka Haase; Markus Fischer; Adelbert Bacher; Sevil Weinkauf; Peter G Vekilov
Journal:  J Am Chem Soc       Date:  2005-03-16       Impact factor: 15.419

10.  Structural biology. Structural genomics, round 2.

Authors:  Robert Service
Journal:  Science       Date:  2005-03-11       Impact factor: 47.728

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  25 in total

1.  The Protein Structure Initiative Structural Biology Knowledgebase Technology Portal: a structural biology web resource.

Authors:  Lida K Gifford; Lester G Carter; Margaret J Gabanyi; Helen M Berman; Paul D Adams
Journal:  J Struct Funct Genomics       Date:  2012-04-06

Review 2.  Microfluidic cartridges preloaded with nanoliter plugs of reagents: an alternative to 96-well plates for screening.

Authors:  Delai L Chen; Rustem F Ismagilov
Journal:  Curr Opin Chem Biol       Date:  2006-05-03       Impact factor: 8.822

Review 3.  Reactions in droplets in microfluidic channels.

Authors:  Helen Song; Delai L Chen; Rustem F Ismagilov
Journal:  Angew Chem Int Ed Engl       Date:  2006-11-13       Impact factor: 15.336

4.  Control and measurement of the phase behavior of aqueous solutions using microfluidics.

Authors:  Jung-Uk Shim; Galder Cristobal; Darren R Link; Todd Thorsen; Yanwei Jia; Katie Piattelli; Seth Fraden
Journal:  J Am Chem Soc       Date:  2007-06-20       Impact factor: 15.419

Review 5.  Automated robotic harvesting of protein crystals-addressing a critical bottleneck or instrumentation overkill?

Authors:  Robert Viola; Peter Carman; Jace Walsh; Daniel Frankel; Bernhard Rupp
Journal:  J Struct Funct Genomics       Date:  2007-10-27

6.  Enhanced bacterial protein expression during auto-induction obtained by alteration of lac repressor dosage and medium composition.

Authors:  Paul G Blommel; Katie J Becker; Petar Duvnjak; Brian G Fox
Journal:  Biotechnol Prog       Date:  2007-05-17

Review 7.  Microfluidics for drug discovery and development: from target selection to product lifecycle management.

Authors:  Lifeng Kang; Bong Geun Chung; Robert Langer; Ali Khademhosseini
Journal:  Drug Discov Today       Date:  2007-11-26       Impact factor: 7.851

8.  A Plug-Based Microfluidic System for Dispensing Lipidic Cubic Phase (LCP) Material Validated by Crystallizing Membrane Proteins in Lipidic Mesophases.

Authors:  Liang Li; Qiang Fu; Christopher A Kors; Lance Stewart; Peter Nollert; Philip D Laible; Rustem F Ismagilov
Journal:  Microfluid Nanofluidics       Date:  2010-06       Impact factor: 2.529

9.  Cryocrystallography in capillaries: critical glycerol concentrations and cooling rates.

Authors:  Matthew Warkentin; Valentina Stanislavskaia; Katherine Hammes; Robert E Thorne
Journal:  J Appl Crystallogr       Date:  2008-07-01       Impact factor: 3.304

10.  Multiparameter screening on SlipChip used for nanoliter protein crystallization combining free interface diffusion and microbatch methods.

Authors:  Liang Li; Wenbin Du; Rustem F Ismagilov
Journal:  J Am Chem Soc       Date:  2010-01-13       Impact factor: 15.419

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