Literature DB >> 12856890

Ab initio quantum chemical investigation of the first steps of the photocycle of phototropin: a model study.

Christian Neiss1, Peter Saalfrank.   

Abstract

Phototropin is a blue light-activated photoreceptor that plays a dominant role in the phototropism of plants. The protein contains two subunits that bind flavin mononucleotide (FMN), which are responsible for the initial steps of the light-induced reaction. It has been proposed that the photoexcited flavin molecule adds a cysteine residue of the protein backbone, thus activating autophosphorylation of the enzyme. In this study, the electronic properties of several FMN-related compounds in different charge and spin states are characterized by means of ab initio quantum mechanical calculations. The model compounds serve as idealized model chromophores for phototropism. Reaction energies are estimated for simple model reactions, roughly representing the addition of a cysteine residue to the flavin molecule. Excitation energies were calculated with the help of time-dependent density functional theory. On the basis of these calculations we propose the following mechanism for the addition reaction: (1) after photoexcitation of FMN out of the singlet ground state S0, excited singlet state(s) are populated; these relax to the lowest excited singlet state S1, and subsequently by intersystem crossing FMN in the lowest triplet state, T1 is formed; (2) the triplet easily removes the neutral hydrogen atom from the H-S group of the cysteine residue; and (3) the resulting thio radical is added.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12856890     DOI: 10.1562/0031-8655(2003)077<0101:aiqcio>2.0.co;2

Source DB:  PubMed          Journal:  Photochem Photobiol        ISSN: 0031-8655            Impact factor:   3.421


  15 in total

1.  Effect of computational methodology on the conformational dynamics of the protein photosensor LOV1 from Chlamydomonas reinhardtii.

Authors:  Emanuel Peter; Bernhard Dick; Stephan A Baeurle
Journal:  J Chem Biol       Date:  2011-03-11

2.  Phot-LOV1: photocycle of a blue-light receptor domain from the green alga Chlamydomonas reinhardtii.

Authors:  Tilman Kottke; Joachim Heberle; Dominic Hehn; Bernhard Dick; Peter Hegemann
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

Review 3.  Plant blue-light receptors.

Authors:  Roopa Banerjee; Alfred Batschauer
Journal:  Planta       Date:  2004-11-18       Impact factor: 4.116

4.  The phot LOV2 domain and its interaction with LOV1.

Authors:  Huimin Guo; Tilman Kottke; Peter Hegemann; Bernhard Dick
Journal:  Biophys J       Date:  2005-05-06       Impact factor: 4.033

5.  Dynamic switching mechanisms in LOV1 and LOV2 domains of plant phototropins.

Authors:  Peter L Freddolino; Markus Dittrich; Klaus Schulten
Journal:  Biophys J       Date:  2006-08-25       Impact factor: 4.033

6.  Primary reactions of the LOV2 domain of phototropin studied with ultrafast mid-infrared spectroscopy and quantum chemistry.

Authors:  Maxime T A Alexandre; Tatiana Domratcheva; Cosimo Bonetti; Luuk J G W van Wilderen; Rienk van Grondelle; Marie-Louise Groot; Klaas J Hellingwerf; John T M Kennis
Journal:  Biophys J       Date:  2009-07-08       Impact factor: 4.033

7.  Signals of LOV1: a computer simulation study on the wildtype LOV1-domain of Chlamydomonas reinhardtii and its mutants.

Authors:  Emanuel Peter; Bernhard Dick; Stephan A Baeurle
Journal:  J Mol Model       Date:  2011-07-15       Impact factor: 1.810

8.  When light falls in LOV: a quantum mechanical/molecular mechanical study of photoexcitation in Phot-LOV1 of Chlamydomonas reinhardtii.

Authors:  Markus Dittrich; Peter L Freddolino; Klaus Schulten
Journal:  J Phys Chem B       Date:  2005-07-07       Impact factor: 2.991

9.  Signaling mechanisms of LOV domains: new insights from molecular dynamics studies.

Authors:  Peter L Freddolino; Kevin H Gardner; Klaus Schulten
Journal:  Photochem Photobiol Sci       Date:  2013-07       Impact factor: 3.982

10.  Recording of blue light-induced energy and volume changes within the wild-type and mutated phot-LOV1 domain from Chlamydomonas reinhardtii.

Authors:  Aba Losi; Tilman Kottke; Peter Hegemann
Journal:  Biophys J       Date:  2004-02       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.