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Literature DB >> 19568795

Recent advances in chemical proteomics: exploring the post-translational proteome.

Abstract

Identification and quantification of multiple proteins from complex mixtures is a central theme in post-genomic biology. Despite recent progress in high-throughput proteomics, proteomic analysis of post-translationally modified (PTM) proteins remains particularly challenging. This mini-review introduces the emerging field of chemical proteomics and reviews recent advances in chemical proteomic technology that are offering striking new insights into the functional biology of post-translational modification.

Year: 2008 PMID： 19568795 PMCID： PMC2698316 DOI： 10.1007/s12154-008-0002-6

Source DB: PubMed Journal: J Chem Biol ISSN： 1864-6158

115 in total

Review 1. The Staudinger ligation-a gift to chemical biology.

Authors: Maja Köhn; Rolf Breinbauer
Journal: Angew Chem Int Ed Engl Date: 2004-06-14 Impact factor: 15.336

2. Chemical probes for the rapid detection of Fatty-acylated proteins in Mammalian cells.

Authors: Howard C Hang; Ernst-Jan Geutjes; Gijsbert Grotenbreg; Annette M Pollington; Marie Jose Bijlmakers; Hidde L Ploegh
Journal: J Am Chem Soc Date: 2007-02-17 Impact factor: 15.419

3. An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.

Authors: Bernd Bodenmiller; Lukas N Mueller; Patrick G A Pedrioli; Delphine Pflieger; Martin A Jünger; Jimmy K Eng; Ruedi Aebersold; W Andy Tao
Journal: Mol Biosyst Date: 2007-02-19

4. Tandem orthogonal proteolysis-activity-based protein profiling (TOP-ABPP)--a general method for mapping sites of probe modification in proteomes.

Authors: Eranthie Weerapana; Anna E Speers; Benjamin F Cravatt
Journal: Nat Protoc Date: 2007 Impact factor: 13.491

Review 5. Post-translational modifications and regulation of the RAS superfamily of GTPases as anticancer targets.

Authors: Panagiotis A Konstantinopoulos; Michalis V Karamouzis; Athanasios G Papavassiliou
Journal: Nat Rev Drug Discov Date: 2007-07 Impact factor: 84.694

Review 6. Proteomic identification of palmitoylated proteins.

Authors: Amy F Roth; Junmei Wan; William N Green; John R Yates; Nicholas G Davis
Journal: Methods Date: 2006-10 Impact factor: 3.608

Review 7. Chemical approaches to deciphering the glycosaminoglycan code.

Authors: Cristal I Gama; Linda C Hsieh-Wilson
Journal: Curr Opin Chem Biol Date: 2005-10-18 Impact factor: 8.822

8. Probing the dynamics of O-GlcNAc glycosylation in the brain using quantitative proteomics.

Authors: Nelly Khidekel; Scott B Ficarro; Peter M Clark; Marian C Bryan; Danielle L Swaney; Jessica E Rexach; Yi E Sun; Joshua J Coon; Eric C Peters; Linda C Hsieh-Wilson
Journal: Nat Chem Biol Date: 2007-05-13 Impact factor: 15.040

9. Potent inhibitor of N-myristoylation: a novel molecular target for cancer.

Authors: Anuraag Shrivastav; Mohammed K Pasha; Ponniah Selvakumar; Sweta Gowda; Douglas J H Olson; Andrew R S Ross; Jonathan R Dimmock; Rajendra K Sharma
Journal: Cancer Res Date: 2003-11-15 Impact factor: 12.701

Review 10. Membrane targeting of lipid modified signal transduction proteins.

Authors: Marilyn D Resh
Journal: Subcell Biochem Date: 2004

7 in total

1. Multifunctional protein labeling via enzymatic N-terminal tagging and elaboration by click chemistry.

Authors: William P Heal; Megan H Wright; Emmanuelle Thinon; Edward W Tate
Journal: Nat Protoc Date: 2011-12-22 Impact factor: 13.491

2. Affinity-based profiling of dehydrogenase subproteomes.

Authors: Xia Ge; Daniel S Sem
Journal: Methods Mol Biol Date: 2012

3. Phenobarbital and propiconazole toxicogenomic profiles in mice show major similarities consistent with the key role that constitutive androstane receptor (CAR) activation plays in their mode of action.

Authors: Richard A Currie; Richard C Peffer; Amber K Goetz; Curtis J Omiecinski; Jay I Goodman
Journal: Toxicology Date: 2014-03-24 Impact factor: 4.221

Review 7. Chemical Glycoproteomics.

Authors: Krishnan K Palaniappan; Carolyn R Bertozzi
Journal: Chem Rev Date: 2016-11-18 Impact factor: 60.622