| Literature DB >> 19557180 |
Janyaporn Phuchareon1, Yoshihito Ohta, Jonathan M Woo, David W Eisele, Osamu Tetsu.
Abstract
Adenoid cystic carcinoma (ACC) is the second most common malignant neoplasm of the salivary glands. Most patients survive more than 5 years after surgery and postoperative radiation therapy. The 10 year survival rate, however, drops to 40%, due to locoregional recurrences and distant metastases. Improving long-term survival in ACC requires the development of more effective systemic therapies based on a better understanding of the biologic behavior of ACC. Much preclinical research in this field involves the use of cultured cells and, to date, several ACC cell lines have been established. Authentication of these cell lines, however, has not been reported. We performed DNA fingerprint analysis on six ACC cell lines using short tandem repeat (STR) examinations and found that all six cell lines had been contaminated with other cells. ACC2, ACC3, and ACCM were determined to be cervical cancer cells (HeLa cells), whereas the ACCS cell line was composed of T24 urinary bladder cancer cells. ACCNS and CAC2 cells were contaminated with cells derived from non-human mammalian species: the cells labeled ACCNS were mouse cells and the CAC2 cells were rat cells. These observations suggest that future studies using ACC cell lines should include cell line authentication to avoid the use of contaminated or non-human cells.Entities:
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Year: 2009 PMID: 19557180 PMCID: PMC2698276 DOI: 10.1371/journal.pone.0006040
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
STR DNA fingerprint analysis of HeLa, ACC2, ACC3, and ACCM cells.
| STR Locus | ||||||||||
| Cell line | AMEL | CSF1PO | D13S317 | D16S539 | D5S818 | D7S820 | TH01 | TPOX | vWA | Percent match to HeLa |
| HeLa | X | 9, 10 | 12, 13.3 | 9, 10 | 11, 12 | 8, 12 | 7 | 8, 12 | 16, 18 | 100 |
| ACC2/Sa | X | 9, 10 | 12, 13.3 | 9, 10 | 11, 12 | 8, 12 | 7 | 8, 12 | 16,17, 18 | 97 |
| ACC2/Zh | X | 9, 10 | 12, 13.3 | 9, 10 | 11, 12 | 8, 12 | 7 | 8, 12 | 16, 18 | 100 |
| ACC3 | X | 9, 10 | 12, 13.3 | 9, 10 | 11, 12 | 8, 12 | 7 | 8, 12 | 17, 18 | 94 |
| ACCM | X | 9, 10 | 12, 13.3 | 9, 10 | 11, 12 | 8, 12 | 7 | 8, 12 | 17, 18 | 94 |
The table shows repeat numbers of allelic ladder components of eight STR loci and AMEL. Electrophoretic profiles of vWA and other markers for these cells are shown in Figures 1 and S2, S3, S4, S5, S6, S7, S8, S9, S10.
Figure 1HeLa contaiminated-ACC2, ACC3, and ACCM demonstrate a variation in the von Willebrand factor gene (vWA).
Electrophoretic profiles of the vWA marker for HeLa, ACC2/Sa, ACC2/Zh, ACC3, and ACCM are shown. Complete STR profiling is shown in Table 1 and Figures S2, S3, S4, S5, S6, S7, S8, S9, S10. A multiplex PCR reaction was performed using two-color detection fluorescent dye-linked primers. One ng of each genomic DNA was independently amplified in a 25 µl reaction volume. The amplified PCR products were separated by capillary electrophoresis on a 3730xI DNA Analyzer (Applied Biosystems) and analyzed using GeneMapper v4.0 software (Applied Biosystems). Cell lines for the study were generously provided by Drs. Takashi Saku (ACC2/Sa and ACC3), Naishuo Zhu (ACC2/Zh), Kanemitsu Shirasuna (ACCS), Noriaki Tanaka (ACCM and ACCNS), and Ruy Jaeger (CAC2). HeLa cells were purchased from the ATCC.
STR DNA fingerprint analysis of ACCS.
| STR Locus | ||||||||||
| Cell line | AMEL | CSF1PO | D13S317 | D16S539 | D5S818 | D7S820 | TH01 | TPOX | vWA | Percent match to ACCS |
| ACCS | X | 12 | 12 | 9 | 10 | 10, 11 | 6 | 8 | 17 | 100 |
| ECV304 | X | 12 | 12 | 9 | 10 | 10, 11 | 6 | 8, 11 | 17 | 95 |
| T24 | X | 10, 12 | 12 | 9 | 10, 12 | 10, 11 | 6 | 8, 11 | 17 | 87 |
| EJ-1 | X | 10, 12 | 12 | 9 | 10, 12 | 10, 11 | 6 | 8, 11 | 17 | 87 |
STR profiling of ACCS cells was compared to data in the Japanese Collection of Research Bioresources (JCRB) database (ECV304, T24 and EJ-1 cells). Electrophoretic profiles of the complete STR markers for ACCS cells are shown in Figures S11 and S12.
Figure 2ACCNS cells were mouse cells and CAC2 cells were rat cells.
A cytochrome C oxidase subunit I (COI) DNA barcoding assay was performed using multiplex species-specific primer sets for 12 species (+, lanes 3, 5, 6 and 7) or 11 species-specific sets without mouse primers (−, lanes 2 and 4). The PCR products were separated in a 2% agarose gel and visualized with ethidium bromide following amplification of 5′ end of COI region. Lanes 1 and 8: 100 bp ladders. Lanes 2 and 3: ACCNS. Lanes 4 and 5: CAC2. Lane 6: Mixed DNA template from 12 species. Lane 7: no template DNA. The animals and expected PCR product sizes were as follows; human (391 bp), cat (341 bp), Chinese hamster (315 bp), rhesus monkey (287 bp), horse (243 bp), African green monkey (222 bp), rat (196 bp), dog (172 bp), mouse (150 bp), rabbit (136 bp), goat (117 bp), and cow (102 bp). The PCR products were sequenced to confirm that they contained the species-specific nucleotide sequence.
Misidentified and cross-contaminated ACC cell lines.
| ACC cell line | Real identity | Actual human malignancy or Species | Evidence |
| ACC2 | HeLa | Uterine adenocarcinoma | STR |
| ACC3 | HeLa | Uterine adenocarcinoma | STR |
| ACCM | HeLa | Uterine adenocarcinoma | STR |
| ACCS | T24 | Urinary bladder carcinoma | STR |
| ACCNS | ? | Mouse cells | DNA barcoding |
| CAC2 | ? | Rat cells | DNA barcoding |
Number of articles citing 6 ACC cell lines.
| Cell line | Number of articles |
| ACC2 | 30 |
| ACC3 | 14 |
| ACCM | 32 |
| ACCS | 7 |
| ACCNS | 1 |
| CAC2 | 10 |
| Total | 94 |
A PubMed search revealed that 75 original research papers citing at least one of the six cell lines analyzed here were published from 1991 to 2008. Some papers used more than one cell line and, thus, the total number was more than 75 publications.